Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.81□□□□□ -1.48
PDLIM7Q9NR12 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 RNU6-839P-201ENST00000363347 108 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 SNORA70.2-201ENST00000364506 135 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 GLULP6-201ENST00000399502 913 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 RPS3AP23-201ENST00000401762 784 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 RPL7P58-201ENST00000402913 758 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 MIR1303-201ENST00000408625 86 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC068287.1-201ENST00000430283 295 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 UBE2FP3-201ENST00000436366 524 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC004865.1-201ENST00000442276 1003 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 RPL7P31-201ENST00000450192 724 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 MTND3P10-201ENST00000450967 341 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AMD1P1-201ENST00000457220 922 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC063943.1-201ENST00000465434 453 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AP000797.1-201ENST00000478870 387 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 RN7SL814P-201ENST00000487715 300 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 RPL7P38-201ENST00000488396 739 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC140172.1-201ENST00000502928 141 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 RPL7L1P13-201ENST00000511702 739 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC108471.1-201ENST00000513977 287 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 RNY4P37-201ENST00000516225 96 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 RN7SKP260-201ENST00000516907 149 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 POLR2KP1-201ENST00000553226 168 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 MIR5096-201ENST00000583713 70 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC023813.4-201ENST00000607580 580 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 AC138649.3-201ENST00000622154 254 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 MIR3688-2-201ENST00000636963 87 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.8□□□□□ -1.48
PDLIM7Q9NR12 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 SDAD1P1-202ENST00000524156 2051 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 CASC19-260ENST00000641828 2001 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 RNU6-297P-201ENST00000384636 107 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 CIR1P3-201ENST00000405137 479 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 HMGB3P23-201ENST00000414981 585 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 SKP1P3-201ENST00000429280 487 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 RPS24P8-201ENST00000431490 402 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 RPL34P20-201ENST00000442771 351 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AC244505.5-201ENST00000443639 207 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AP000542.1-201ENST00000448473 371 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AC103987.1-201ENST00000473394 348 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 SNX5P1-201ENST00000505757 1041 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AC093824.1-201ENST00000508796 343 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AC012400.1-201ENST00000518452 381 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms