Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC005344.1-201ENST00000613391 459 ntBASIC3.52□□□□□ -1.85
LRTM1Q9HBL6 AC243756.2-201ENST00000618406 463 ntBASIC3.52□□□□□ -1.85
LRTM1Q9HBL6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.52□□□□□ -1.85
LRTM1Q9HBL6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
LRTM1Q9HBL6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.52□□□□□ -1.85
LRTM1Q9HBL6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LRTM1Q9HBL6 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.52□□□□□ -1.85
LRTM1Q9HBL6 MTCO1P14-201ENST00000441695 1559 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 MIR30B-201ENST00000384850 88 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 RPL30P2-201ENST00000414021 291 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 OR6K4P-201ENST00000423179 955 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AL035246.1-201ENST00000433554 1255 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AL645931.1-201ENST00000439737 410 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AC010655.1-201ENST00000449336 292 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 HMGB3P21-201ENST00000452483 547 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 RN7SKP157-201ENST00000516174 282 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 PAICSP4-201ENST00000517543 1253 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AP000619.3-201ENST00000535634 1127 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AC093014.1-201ENST00000548926 724 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 MIR4716-201ENST00000579628 84 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AL049844.2-201ENST00000604280 628 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AL354798.1-201ENST00000622505 329 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AL732618.1-201ENST00000623251 301 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 CFTRP2-201ENST00000634304 199 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AP004289.2-201ENST00000444413 1457 ntBASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
LRTM1Q9HBL6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 RNA5SP42-201ENST00000364278 115 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 RNA5SP235-201ENST00000365411 114 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 RNA5SP105-201ENST00000391123 113 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 MRPS18BP2-201ENST00000434310 759 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 RPS26P40-201ENST00000435209 294 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 TRBV8-1-201ENST00000481590 279 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 HMGB3P14-201ENST00000494195 599 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AL139099.1-201ENST00000497398 403 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AC091515.1-201ENST00000548110 679 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AC023161.2-201ENST00000551218 780 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AC087499.8-201ENST00000578406 226 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 MIR5685-201ENST00000579080 79 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 SRGNP1-201ENST00000603392 451 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AC083899.3-201ENST00000603413 594 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AC010200.2-201ENST00000605098 235 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AC019176.2-201ENST00000611579 315 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AL713922.2-201ENST00000619384 716 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AC010809.3-201ENST00000621310 641 ntBASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
LRTM1Q9HBL6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 AC127526.1-201ENST00000417526 366 ntBASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 MTND2P15-201ENST00000418575 892 ntBASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 AC073069.1-201ENST00000428657 441 ntBASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 AC074367.1-201ENST00000438685 1125 ntBASIC3.49□□□□□ -1.85
LRTM1Q9HBL6 RPL6P5-201ENST00000445678 828 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms