Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.9□□□□□ -1.79
TRIM4Q9C037 RNU1-103P-201ENST00000516502 125 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM4Q9C037 MTND5P21-201ENST00000531961 522 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM4Q9C037 AC114878.2-201ENST00000604863 1251 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM4Q9C037 AC004241.3-201ENST00000611728 517 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 AL450489.1-201ENST00000612071 468 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 AL442067.2-201ENST00000614033 363 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM4Q9C037 AL034408.1-202ENST00000636088 415 ntBASIC3.9□□□□□ -1.79
TRIM4Q9C037 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
TRIM4Q9C037 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM4Q9C037 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM4Q9C037 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM4Q9C037 ZNF285B-201ENST00000561698 1767 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM4Q9C037 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM4Q9C037 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 ENSAP1-201ENST00000392855 326 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM4Q9C037 RPS15AP6-201ENST00000420703 385 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 CYCSP32-201ENST00000440548 321 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 AC010468.1-201ENST00000461022 817 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 SETP6-201ENST00000479329 568 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 CAB39P1-201ENST00000502277 460 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 AC074250.1-201ENST00000511117 192 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 OR8I1P-201ENST00000529291 931 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 AC025260.1-201ENST00000548858 430 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 AL845331.3-202ENST00000562856 261 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 AC022655.2-201ENST00000577280 318 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 AP000255.1-201ENST00000610276 676 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 SCARNA15.3-201ENST00000626315 122 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 SCARNA4.1-201ENST00000628597 123 ntBASIC3.89□□□□□ -1.79
TRIM4Q9C037 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM4Q9C037 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM4Q9C037 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM4Q9C037 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
TRIM4Q9C037 USP8P1-201ENST00000494673 3183 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM4Q9C037 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM4Q9C037 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM4Q9C037 RAD1P1-201ENST00000231383 813 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM4Q9C037 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM4Q9C037 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM4Q9C037 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM4Q9C037 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM4Q9C037 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM4Q9C037 RAB9AP5-201ENST00000437794 597 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM4Q9C037 AC006011.1-201ENST00000442758 349 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 VN1R25P-201ENST00000443385 738 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 RAB9AP2-201ENST00000443911 597 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 UBE2V2P4-201ENST00000447495 259 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 RPL12P26-201ENST00000452430 487 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 VN1R40P-201ENST00000455196 941 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.88□□□□□ -1.79
TRIM4Q9C037 AF213884.1-201ENST00000488102 463 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 AC004069.2-201ENST00000505438 1114 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 RPL23AP94-201ENST00000512518 302 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 AC099522.1-202ENST00000514718 367 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 RNU7-143P-201ENST00000516781 65 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.88□□□□□ -1.79
TRIM4Q9C037 AC026403.1-201ENST00000518938 295 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 HIGD1AP10-201ENST00000527837 282 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM4Q9C037 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.88□□□□□ -1.79
TRIM4Q9C037 AC015849.6-201ENST00000605454 474 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 AC005000.2-201ENST00000605468 310 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 AC006946.3-201ENST00000609791 756 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 AC116447.1-201ENST00000613153 453 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 AC007342.8-201ENST00000623278 678 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 AP005264.7-201ENST00000625003 745 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 AL773545.4-201ENST00000637262 310 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 AL513478.4-201ENST00000641636 310 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM4Q9C037 IPO8P1-201ENST00000455509 3109 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 CASC19-284ENST00000642142 1868 ntBASIC3.88□□□□□ -1.79
TRIM4Q9C037 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM4Q9C037 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM4Q9C037 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM4Q9C037 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms