Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AC114781.3-201ENST00000512083 142 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 RNU6-1212P-201ENST00000517023 104 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 RNA5SP454-201ENST00000517231 127 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AP000857.1-201ENST00000532151 543 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AC022404.1-201ENST00000555320 273 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 MIR1269B-201ENST00000580405 75 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 MIR3118-1-201ENST00000581787 76 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 FAM27E2-201ENST00000619668 403 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AC027575.3-201ENST00000583058 2747 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 LCOR-201ENST00000286067 4542 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 AC005839.1-201ENST00000624148 3213 ntBASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.33□□□□□ -1.4
CNTNAP3Q9BZ76 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 Y_RNA.152-201ENST00000363578 100 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 Y_RNA.380-201ENST00000365663 111 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 Y_RNA.462-201ENST00000384268 102 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 RNU6-601P-201ENST00000384540 107 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 GJA6P-201ENST00000415117 1042 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 MTCO3P29-201ENST00000432119 779 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 MORF4-201ENST00000447135 971 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 CFL1P4-201ENST00000451536 498 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AC126389.1-201ENST00000477436 290 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AC011005.2-201ENST00000487324 359 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 TRBVA-201ENST00000498804 316 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 OR51K1P-201ENST00000510214 950 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 IGKV2-36-201ENST00000519999 223 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 RPL21P7-201ENST00000557463 483 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AC092121.1-201ENST00000569452 202 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AP001029.3-201ENST00000588063 596 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AL589674.2-201ENST00000604304 337 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AC004792.1-201ENST00000614523 137 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AL732372.2-225ENST00000642124 456 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AC090132.1-201ENST00000524071 1480 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 AC079753.1-201ENST00000623243 3868 ntBASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
CNTNAP3Q9BZ76 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 AL121949.2-201ENST00000403446 1548 ntBASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 RNU6-713P-201ENST00000384761 107 ntBASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 RNU1-149P-201ENST00000390870 161 ntBASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 RNA5SP474-201ENST00000391234 90 ntBASIC6.31□□□□□ -1.4
CNTNAP3Q9BZ76 RPL21P1-201ENST00000399532 476 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms