Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 AC005094.1-201ENST00000440420 368 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC012512.1-201ENST00000446594 718 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 AL031584.1-201ENST00000447169 754 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 SNORD97-201ENST00000459187 142 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC011476.1-201ENST00000466725 307 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 RPL23AP11-201ENST00000475260 469 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CITED4Q96RK1 SNORA58-201ENST00000505219 137 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC104806.1-201ENST00000508720 308 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC097486.1-201ENST00000515331 210 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 RNU6-1170P-201ENST00000515974 106 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 RNU6-559P-201ENST00000516151 98 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 SSU72P6-201ENST00000532644 488 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 COX6CP11-201ENST00000555293 229 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 FRG2DP-202ENST00000566967 323 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC005518.2-201ENST00000603254 282 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 AL022099.1-201ENST00000604551 712 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC093838.1-201ENST00000613014 469 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 FAM27E3-202ENST00000614611 340 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 uc_338.11-201ENST00000619132 160 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CITED4Q96RK1 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CITED4Q96RK1 WNK1-220ENST00000574564 1401 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CITED4Q96RK1 AC004158.1-201ENST00000564508 4319 ntBASIC5.71□□□□□ -1.5
CITED4Q96RK1 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CITED4Q96RK1 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 BRAFP1-201ENST00000445336 2703 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 BDP1P-201ENST00000582658 1990 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 MIR133A2-201ENST00000347538 102 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 AC019155.1-201ENST00000382242 574 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 SNORA24.1-201ENST00000384401 135 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 RPL9P21-201ENST00000392269 505 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 UBE2V1P2-201ENST00000397758 440 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 AL109755.1-201ENST00000401791 649 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 RN7SKP30-201ENST00000411373 334 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 RPS7P15-201ENST00000415804 584 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 AL354868.1-201ENST00000417077 482 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 SAGE2P-201ENST00000420011 2126 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 MTND2P23-201ENST00000422990 651 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 LYPLA1P1-201ENST00000434514 622 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 HMGB3P11-201ENST00000440127 604 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 MTCYBP6-201ENST00000441810 138 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 PRPS1P1-201ENST00000445305 876 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 snoU109.4-201ENST00000458953 143 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 RNU7-180P-201ENST00000459240 63 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 SNORD19B-201ENST00000459623 84 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 AC022730.2-201ENST00000465359 452 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 RPL7AP30-201ENST00000482859 796 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 RN7SKP13-201ENST00000515933 244 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 RNU6-327P-201ENST00000516270 127 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 RNA5SP92-201ENST00000516437 110 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 AC100823.2-201ENST00000518337 699 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 MYL12AP1-201ENST00000518490 515 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 AP006587.5-201ENST00000532033 739 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms