Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNU4-34P-201ENST00000410431 124 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 MTND4P3-201ENST00000417829 541 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 AC114973.1-201ENST00000429057 632 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 CEACAMP9-201ENST00000442990 513 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 NPM1P13-201ENST00000452663 865 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 CAB39P1-201ENST00000502277 460 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 RNU6-885P-201ENST00000516607 104 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 IFITM8P-201ENST00000522529 394 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 AC092470.1-201ENST00000546187 132 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 AC093519.1-201ENST00000566109 298 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 RPL23AP97-201ENST00000568955 471 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 AC098935.2-201ENST00000604222 466 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 AC073387.2-201ENST00000604797 784 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 AL009028.1-201ENST00000604895 802 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 AC016769.4-201ENST00000616893 535 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS33AQ96AX1 FAM91A3P-201ENST00000456826 2544 ntBASIC4.24□□□□□ -1.73
VPS33AQ96AX1 OR11H5P-202ENST00000641612 1325 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AL031985.3-201ENST00000565390 2449 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 RN7SKP149-201ENST00000363008 344 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 MIR659-201ENST00000384963 97 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 RNA5SP239-201ENST00000410218 129 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 VN1R51P-201ENST00000411675 945 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 RPS20P14-201ENST00000412545 360 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AL391219.1-201ENST00000422570 483 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AC092832.1-201ENST00000422934 400 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AC005517.2-201ENST00000424673 553 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 PRELID3BP10-201ENST00000431957 584 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 RPS6P12-201ENST00000432491 726 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 USP9YP7-201ENST00000436723 430 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 CEACAMP7-201ENST00000444105 496 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 RPL23AP43-201ENST00000446445 471 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 USP9YP32-201ENST00000452432 430 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 RPS27AP17-201ENST00000463344 455 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AC104982.1-201ENST00000478775 574 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 RN7SL629P-201ENST00000489622 285 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 IGLV2-34-201ENST00000490007 283 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 PARP4P3-201ENST00000510265 317 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 MTATP6P9-201ENST00000515039 680 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 HNRNPKP5-201ENST00000515300 253 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AC019227.1-201ENST00000526902 510 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 OR4A45P-201ENST00000529954 901 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AC122134.1-202ENST00000569111 1201 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 OR4G1P-201ENST00000588632 938 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AL022067.1-201ENST00000602426 454 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AL157770.1-201ENST00000623049 439 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 AC006065.6-201ENST00000625201 545 ntBASIC4.23□□□□□ -1.73
VPS33AQ96AX1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS33AQ96AX1 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS33AQ96AX1 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms