Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HMGB4Q8WW32 AL731532.2-201ENST00000623542 1953 ntBASIC4.74□□□□□ -1.65
HMGB4Q8WW32 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HMGB4Q8WW32 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HMGB4Q8WW32 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
HMGB4Q8WW32 AC025125.1-201ENST00000624743 1922 ntBASIC4.74□□□□□ -1.65
HMGB4Q8WW32 AC108467.2-201ENST00000617640 1597 ntBASIC4.74□□□□□ -1.65
HMGB4Q8WW32 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
HMGB4Q8WW32 RAD17P1-201ENST00000418130 2042 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AL136164.3-201ENST00000624429 3978 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC025031.4-201ENST00000621248 3271 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 IL6STP1-201ENST00000346911 1020 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 RNA5SP391-201ENST00000363456 119 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 RNA5SP509-201ENST00000364577 119 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AL121978.1-201ENST00000402778 359 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 MIR1193-201ENST00000408109 78 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 RNA5SP296-201ENST00000410523 111 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 PTP4A1P5-201ENST00000420305 455 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC023347.2-201ENST00000433994 462 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 YWHAZP7-201ENST00000436906 631 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC241584.1-201ENST00000438469 1241 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AL133217.1-201ENST00000450980 425 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 NUTF2P7-201ENST00000453086 375 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC010618.1-201ENST00000469924 477 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 RNA5SP464-201ENST00000516251 108 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 SNORA48.10-201ENST00000516965 160 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 IGLVIV-65-201ENST00000517313 360 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC105185.1-201ENST00000518705 535 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC107918.3-201ENST00000533272 382 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 TRAV15-201ENST00000556680 249 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC002400.1-201ENST00000569310 726 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC127024.5-201ENST00000580085 462 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC008782.1-201ENST00000603386 430 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC133552.5-201ENST00000604266 540 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AL139418.1-201ENST00000613613 177 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AL133243.1-201ENST00000614487 366 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC011944.2-201ENST00000624440 683 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC068724.3-201ENST00000625906 87 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 U3.53-201ENST00000628922 216 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 AC005539.1-201ENST00000443768 1479 ntBASIC4.73□□□□□ -1.65
HMGB4Q8WW32 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
HMGB4Q8WW32 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HMGB4Q8WW32 AC107982.1-201ENST00000507171 1300 ntBASIC4.72□□□□□ -1.65
HMGB4Q8WW32 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMGB4Q8WW32 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMGB4Q8WW32 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMGB4Q8WW32 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HMGB4Q8WW32 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HMGB4Q8WW32 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.72□□□□□ -1.65
HMGB4Q8WW32 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMGB4Q8WW32 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMGB4Q8WW32 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HMGB4Q8WW32 OR56B2P-201ENST00000317102 954 ntBASIC4.72□□□□□ -1.65
HMGB4Q8WW32 RNU6-251P-201ENST00000363235 104 ntBASIC4.72□□□□□ -1.65
HMGB4Q8WW32 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HMGB4Q8WW32 ATP5F1P3-201ENST00000397213 657 ntBASIC4.72□□□□□ -1.65
HMGB4Q8WW32 Z98745.1-201ENST00000402553 494 ntBASIC4.72□□□□□ -1.65
HMGB4Q8WW32 RPL21P67-201ENST00000402896 478 ntBASIC4.72□□□□□ -1.65
HMGB4Q8WW32 AL590609.2-201ENST00000421430 368 ntBASIC4.72□□□□□ -1.65
HMGB4Q8WW32 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.72□□□□□ -1.65
HMGB4Q8WW32 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.72□□□□□ -1.65
HMGB4Q8WW32 AC005345.1-201ENST00000431868 217 ntBASIC4.72□□□□□ -1.65
HMGB4Q8WW32 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.72□□□□□ -1.65
HMGB4Q8WW32 AL591623.2-201ENST00000449978 222 ntBASIC4.72□□□□□ -1.65
HMGB4Q8WW32 PRPF38AP1-201ENST00000451976 933 ntBASIC4.72□□□□□ -1.65
HMGB4Q8WW32 RPL12P26-201ENST00000452430 487 ntBASIC4.72□□□□□ -1.65
HMGB4Q8WW32 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HMGB4Q8WW32 HMGN3P1-201ENST00000453847 193 ntBASIC4.72□□□□□ -1.65
HMGB4Q8WW32 AC104763.1-201ENST00000475274 360 ntBASIC4.72□□□□□ -1.65
HMGB4Q8WW32 RN7SL41P-201ENST00000476144 297 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms