Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS8Q8N3P4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
VPS8Q8N3P4 RPL30P2-201ENST00000414021 291 ntBASIC5.21□□□□□ -1.58
VPS8Q8N3P4 AC012065.2-201ENST00000421295 375 ntBASIC5.21□□□□□ -1.58
VPS8Q8N3P4 AC009263.1-201ENST00000441193 1239 ntBASIC5.21□□□□□ -1.58
VPS8Q8N3P4 AL133244.1-201ENST00000456007 258 ntBASIC5.21□□□□□ -1.58
VPS8Q8N3P4 RPL23AP67-201ENST00000465341 474 ntBASIC5.21□□□□□ -1.58
VPS8Q8N3P4 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS8Q8N3P4 MIR2114-201ENST00000516645 80 ntBASIC5.21□□□□□ -1.58
VPS8Q8N3P4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS8Q8N3P4 AC011611.1-201ENST00000552179 197 ntBASIC5.21□□□□□ -1.58
VPS8Q8N3P4 AL390334.1-201ENST00000556395 450 ntBASIC5.21□□□□□ -1.58
VPS8Q8N3P4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS8Q8N3P4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS8Q8N3P4 AC110801.1-201ENST00000623590 212 ntBASIC5.21□□□□□ -1.58
VPS8Q8N3P4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
VPS8Q8N3P4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS8Q8N3P4 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS8Q8N3P4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VPS8Q8N3P4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS8Q8N3P4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS8Q8N3P4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VPS8Q8N3P4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS8Q8N3P4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VPS8Q8N3P4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
VPS8Q8N3P4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS8Q8N3P4 MIR30E-201ENST00000362104 92 ntBASIC5.2□□□□□ -1.58
VPS8Q8N3P4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS8Q8N3P4 OR52E6-202ENST00000379946 954 ntBASIC5.2□□□□□ -1.58
VPS8Q8N3P4 AC008280.1-201ENST00000418851 412 ntBASIC5.2□□□□□ -1.58
VPS8Q8N3P4 AL513174.1-201ENST00000423182 629 ntBASIC5.2□□□□□ -1.58
VPS8Q8N3P4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS8Q8N3P4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS8Q8N3P4 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.2□□□□□ -1.58
VPS8Q8N3P4 RPL7P47-201ENST00000497299 556 ntBASIC5.2□□□□□ -1.58
VPS8Q8N3P4 IGKV2-23-201ENST00000518729 323 ntBASIC5.2□□□□□ -1.58
VPS8Q8N3P4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS8Q8N3P4 AC009303.3-201ENST00000591103 736 ntBASIC5.2□□□□□ -1.58
VPS8Q8N3P4 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.2□□□□□ -1.58
VPS8Q8N3P4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS8Q8N3P4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS8Q8N3P4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS8Q8N3P4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS8Q8N3P4 HMGN1P24-201ENST00000412282 298 ntBASIC5.19□□□□□ -1.58
VPS8Q8N3P4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS8Q8N3P4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS8Q8N3P4 AC104978.1-201ENST00000449387 391 ntBASIC5.19□□□□□ -1.58
VPS8Q8N3P4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS8Q8N3P4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS8Q8N3P4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
VPS8Q8N3P4 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS8Q8N3P4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS8Q8N3P4 MIR2682-201ENST00000580305 110 ntBASIC5.19□□□□□ -1.58
VPS8Q8N3P4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS8Q8N3P4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS8Q8N3P4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
VPS8Q8N3P4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
VPS8Q8N3P4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS8Q8N3P4 MTCO1P7-201ENST00000419523 1542 ntBASIC5.18□□□□□ -1.58
VPS8Q8N3P4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS8Q8N3P4 BCLAF1P1-201ENST00000505813 2752 ntBASIC5.18□□□□□ -1.58
VPS8Q8N3P4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS8Q8N3P4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS8Q8N3P4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VPS8Q8N3P4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS8Q8N3P4 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.18□□□□□ -1.58
VPS8Q8N3P4 AC109925.1-201ENST00000478069 331 ntBASIC5.18□□□□□ -1.58
VPS8Q8N3P4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS8Q8N3P4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS8Q8N3P4 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.18□□□□□ -1.58
VPS8Q8N3P4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS8Q8N3P4 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.18□□□□□ -1.58
VPS8Q8N3P4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS8Q8N3P4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS8Q8N3P4 MIR5680-201ENST00000577577 84 ntBASIC5.18□□□□□ -1.58
VPS8Q8N3P4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS8Q8N3P4 AL034351.1-201ENST00000605288 668 ntBASIC5.18□□□□□ -1.58
VPS8Q8N3P4 RNVU1-4-201ENST00000612985 164 ntBASIC5.18□□□□□ -1.58
VPS8Q8N3P4 AC100793.4-201ENST00000613683 429 ntBASIC5.18□□□□□ -1.58
VPS8Q8N3P4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS8Q8N3P4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS8Q8N3P4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VPS8Q8N3P4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VPS8Q8N3P4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS8Q8N3P4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS8Q8N3P4 AC020893.1-201ENST00000502452 580 ntBASIC5.17□□□□□ -1.58
VPS8Q8N3P4 AC110794.1-201ENST00000505816 425 ntBASIC5.17□□□□□ -1.58
VPS8Q8N3P4 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS8Q8N3P4 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.17□□□□□ -1.58
VPS8Q8N3P4 RMST_8.1-201ENST00000610287 165 ntBASIC5.17□□□□□ -1.58
VPS8Q8N3P4 AL356321.1-201ENST00000621360 228 ntBASIC5.17□□□□□ -1.58
VPS8Q8N3P4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS8Q8N3P4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VPS8Q8N3P4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS8Q8N3P4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS8Q8N3P4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS8Q8N3P4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS8Q8N3P4 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS8Q8N3P4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC5.16□□□□□ -1.58
VPS8Q8N3P4 RNU6-55P-201ENST00000411092 107 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms