Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 BMS1P3-201ENST00000372011 932 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 RNU6-178P-201ENST00000384631 104 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 MRPS36P1-201ENST00000421291 307 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 RPL7P57-201ENST00000423238 740 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AL732292.1-201ENST00000426692 226 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 RPL37P1-201ENST00000432310 284 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC093155.1-201ENST00000440164 826 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 MRPL48P1-201ENST00000445390 636 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 NECAP1P2-201ENST00000455668 727 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 PPIAP21-201ENST00000464473 501 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 RPS23P7-201ENST00000466210 444 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC005351.1-201ENST00000511152 786 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC087808.1-201ENST00000520501 361 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC010198.2-201ENST00000550612 259 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 SERPINE4P-201ENST00000554978 281 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC110743.1-201ENST00000584870 478 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC233280.2-201ENST00000603917 1070 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC091304.6-201ENST00000619761 202 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AP005019.3-201ENST00000620418 560 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC068057.2-201ENST00000624047 895 ntBASIC4.25□□□□□ -1.73
BEST3Q8N1M1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BEST3Q8N1M1 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AL031119.1-201ENST00000404707 1879 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 FAM3C2-201ENST00000312214 681 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 RNU6-1066P-201ENST00000363573 105 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 RNY3P9-201ENST00000384727 106 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 ATP5F1P2-201ENST00000398143 760 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 RPL7AP25-201ENST00000423357 805 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 RPL12P34-201ENST00000424532 479 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AL031736.2-201ENST00000426573 787 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AL353597.2-202ENST00000434901 373 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 TMX2P1-201ENST00000436507 708 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 FGF7P5-201ENST00000441829 291 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 RPL23AP76-201ENST00000441860 458 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 RPL21P133-201ENST00000443666 476 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 EEF1A1P1-201ENST00000447052 739 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 MTCO2P25-201ENST00000447065 681 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AL034418.1-201ENST00000448675 860 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AC239809.1-201ENST00000450470 217 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 SCARNA10-201ENST00000459255 330 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 RPL5P24-201ENST00000463742 885 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 RPL21P71-201ENST00000465598 459 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AC011352.3-201ENST00000505162 593 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 MTCYBP16-201ENST00000509187 1129 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 RN7SKP96-201ENST00000516948 297 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AC134698.5-201ENST00000519444 336 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 SMARCE1P4-201ENST00000523647 241 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 ZNF321P-202ENST00000550843 495 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AC087465.1-201ENST00000560574 245 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms