Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RNU6-169P-201ENST00000365336 107 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 RNA5SP284-201ENST00000384547 118 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 PCNPP3-201ENST00000393579 471 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 ARF4P3-201ENST00000397387 509 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AL078604.1-201ENST00000404609 466 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AL023284.3-201ENST00000407767 334 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 RNU2-36P-201ENST00000410361 191 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 RN7SKP229-201ENST00000410465 302 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AC093155.2-201ENST00000420734 937 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AL139396.1-201ENST00000421137 167 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 SKA2P1-201ENST00000425592 390 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AF228730.2-201ENST00000438784 848 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 Y_RNA.700-201ENST00000516806 100 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 RNA5SP454-201ENST00000517231 127 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 IGLV3-6-201ENST00000523937 250 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AP003396.4-201ENST00000527574 265 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 GNAI2P1-201ENST00000541815 315 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AL354984.3-201ENST00000604803 325 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 MTND4LP5-201ENST00000605152 292 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AC069542.2-201ENST00000624816 216 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 SOCS5P3-201ENST00000425115 1576 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 RNU6-280P-201ENST00000364145 104 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 RNU6-108P-201ENST00000365558 107 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 RNU6-38P-201ENST00000384085 107 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AL121972.1-201ENST00000402023 252 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 BOLA3P4-201ENST00000418151 400 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC006548.1-201ENST00000427470 102 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 OR3D1P-201ENST00000438288 955 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC105402.2-201ENST00000438503 358 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AL138799.3-201ENST00000438968 350 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 MORF4-201ENST00000447135 971 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 SLC31A1P1-201ENST00000451221 567 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 CFL1P4-201ENST00000451536 498 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 RNU6-333P-201ENST00000459117 107 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 RN7SL214P-201ENST00000487317 265 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC114801.2-201ENST00000503825 781 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 Y_RNA.667-201ENST00000516212 107 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 IGKV1D-22-201ENST00000518953 324 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 HSPE1P20-201ENST00000538133 289 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AP002770.2-201ENST00000543613 532 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 RPA2P1-201ENST00000556557 721 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC010547.7-201ENST00000570323 333 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC130289.1-201ENST00000577321 73 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AL022099.1-201ENST00000604551 712 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC245014.3-201ENST00000618589 347 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 AC091925.2-201ENST00000625059 256 ntBASIC6.53□□□□□ -1.36
NPAS3Q8IXF0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms