Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 RNU6-730P-201ENST00000383954 104 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 SNORA51.8-201ENST00000384234 132 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 MT-TC-201ENST00000387405 66 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AL589647.1-201ENST00000402485 466 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AL591848.1-201ENST00000413092 322 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 MOB1AP1-201ENST00000430903 535 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 RPS5P7-201ENST00000456664 608 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 RNA5SP497-201ENST00000516081 97 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC034205.1-201ENST00000520621 638 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AP001880.2-201ENST00000538233 448 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC090502.2-201ENST00000549267 280 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC022662.1-201ENST00000580252 331 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 IGHV3-29-201ENST00000604817 344 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC078899.5-201ENST00000612475 178 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AL354976.1-201ENST00000613843 387 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC009318.4-201ENST00000620496 486 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AP001002.2-201ENST00000625137 386 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AC092435.4-201ENST00000623012 4159 ntBASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.13□□□□□ -1.75
LINC00346Q8IVM7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 MTCO1P14-201ENST00000441695 1559 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 RN7SKP44-201ENST00000363602 316 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 RNU6-374P-201ENST00000364146 108 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 RNU6-339P-201ENST00000384310 107 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 RNU6-837P-201ENST00000391056 108 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 RPL31P1-201ENST00000398116 372 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 SPTLC1P2-201ENST00000407089 121 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 NRBF2P2-201ENST00000413087 861 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 COX6B1P1-201ENST00000415962 213 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 MTND2P16-201ENST00000419987 799 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 AC004074.1-201ENST00000421810 1063 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 KCTD10P1-201ENST00000434203 625 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 MTND2P20-201ENST00000440805 661 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 OR1H1P-201ENST00000448731 937 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 AC063943.1-201ENST00000465434 453 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 AC090142.1-201ENST00000465776 462 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 RN7SL177P-201ENST00000476596 299 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 RPL5P23-201ENST00000496040 868 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 AC010460.2-201ENST00000509054 677 ntBASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.12□□□□□ -1.75
LINC00346Q8IVM7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms