Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 RNU1-130P-201ENST00000363930 160 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 SNORA70E-201ENST00000384492 135 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 RNU6-1257P-201ENST00000384625 110 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 OR6C69P-201ENST00000394268 893 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AL078604.1-201ENST00000404609 466 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 ZNF603P-201ENST00000405613 487 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 BTF3P8-201ENST00000414577 526 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 TMSB10P2-201ENST00000416049 131 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC008280.1-201ENST00000418851 412 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AL139095.3-201ENST00000419672 1203 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC062016.2-201ENST00000420950 676 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 RPS26P56-201ENST00000444468 240 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 RPL7P59-201ENST00000447700 943 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 HMGN3P1-201ENST00000453847 193 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC010469.1-201ENST00000463864 576 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC087879.1-201ENST00000474343 374 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 RPL21P103-201ENST00000479921 488 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC113430.1-201ENST00000506872 718 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC069306.1-201ENST00000507006 843 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC008837.1-201ENST00000511513 412 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 MTND5P21-201ENST00000531961 522 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 MTCYBP28-201ENST00000566728 1132 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 MIR3939-201ENST00000582614 106 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC090330.1-201ENST00000588646 764 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AL138721.1-201ENST00000616756 179 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC006065.6-201ENST00000625201 545 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC027290.2-201ENST00000623210 18662 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AL592182.3-201ENST00000642132 3304 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 AC111188.2-201ENST00000529697 1387 ntBASIC4.52□□□□□ -1.69
PRPF39Q86UA1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 MTND4P9-201ENST00000507819 1346 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 MIR448-201ENST00000362131 111 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC011933.1-201ENST00000413334 321 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 RPL23AP25-201ENST00000430973 463 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 PHBP16-201ENST00000446318 950 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC104306.1-201ENST00000449702 371 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 NDUFS5P3-201ENST00000450668 321 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC116533.1-201ENST00000459748 321 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC079804.1-201ENST00000461922 436 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC053481.1-201ENST00000467217 306 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC012170.1-201ENST00000495139 359 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC011352.3-201ENST00000505162 593 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC109471.1-201ENST00000511631 612 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC093755.1-201ENST00000512950 1023 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 RNA5SP154-201ENST00000516193 111 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 snoZ278.1-201ENST00000517059 112 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 MYL12AP1-201ENST00000518490 515 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AP001160.4-201ENST00000596971 382 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC020910.2-201ENST00000603635 610 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AP000238.1-201ENST00000608759 426 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AC105227.2-201ENST00000615075 605 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 OR52H1-202ENST00000641796 1061 ntBASIC4.51□□□□□ -1.69
PRPF39Q86UA1 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF39Q86UA1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms