Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC021749.1-201ENST00000604322 607 ntBASIC5.42□□□□□ -1.54
LONRF3Q496Y0 AL121932.1-201ENST00000605542 214 ntBASIC5.42□□□□□ -1.54
LONRF3Q496Y0 HSPE1P14-201ENST00000605812 302 ntBASIC5.42□□□□□ -1.54
LONRF3Q496Y0 AP003392.5-201ENST00000607857 415 ntBASIC5.42□□□□□ -1.54
LONRF3Q496Y0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.42□□□□□ -1.54
LONRF3Q496Y0 AP005137.2-201ENST00000609238 400 ntBASIC5.42□□□□□ -1.54
LONRF3Q496Y0 AL360219.1-201ENST00000610230 366 ntBASIC5.42□□□□□ -1.54
LONRF3Q496Y0 AC007497.1-201ENST00000610421 561 ntBASIC5.42□□□□□ -1.54
LONRF3Q496Y0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.42□□□□□ -1.54
LONRF3Q496Y0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LONRF3Q496Y0 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.42□□□□□ -1.54
LONRF3Q496Y0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LONRF3Q496Y0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LONRF3Q496Y0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.42□□□□□ -1.54
LONRF3Q496Y0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
LONRF3Q496Y0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
LONRF3Q496Y0 AL022322.2-201ENST00000624072 20397 ntBASIC5.42□□□□□ -1.54
LONRF3Q496Y0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LONRF3Q496Y0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 TLK1P1-201ENST00000456760 2440 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 RN7SKP44-201ENST00000363602 316 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 RNU1-85P-201ENST00000364127 164 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 RNVU1-6-201ENST00000364688 164 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AL079342.2-201ENST00000403367 482 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AL356131.1-201ENST00000405826 414 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 RNU6-575P-201ENST00000411326 105 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 MFSD13B-201ENST00000420133 1290 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AC090960.1-201ENST00000421072 306 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 RPL7P57-201ENST00000423238 740 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 NIPA2P1-201ENST00000426223 976 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 RPS17P8-201ENST00000434525 335 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AC093414.1-201ENST00000434712 514 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 MTND4P32-201ENST00000437189 1237 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AL133217.1-201ENST00000450980 425 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 NECAP1P2-201ENST00000455668 727 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 CYCSP34-201ENST00000458172 304 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 SNORD108-201ENST00000459332 71 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 RN7SL860P-201ENST00000473738 223 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 RN7SL346P-201ENST00000491561 294 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 MTCO1P47-201ENST00000523889 1271 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AL356057.1-201ENST00000533798 831 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AP001880.2-201ENST00000538233 448 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 MIR4737-201ENST00000583979 81 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 PIGPP4-201ENST00000584447 307 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AC020910.3-201ENST00000603701 874 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AL022161.1-201ENST00000604390 213 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AC099676.1-201ENST00000608886 657 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AP000676.3-201ENST00000623299 569 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AC124312.6-202ENST00000623624 418 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 FAM157B-203ENST00000639350 358 ntBASIC5.41□□□□□ -1.54
LONRF3Q496Y0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LONRF3Q496Y0 AL359922.3-201ENST00000624779 1670 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AC000367.1-201ENST00000452711 1766 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.4□□□□□ -1.54
LONRF3Q496Y0 RNU6-398P-201ENST00000384143 109 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 MIR141-201ENST00000384975 95 ntBASIC5.4□□□□□ -1.54
LONRF3Q496Y0 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 214.7 ms