Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.56□□□□□ -1.68
RAE1P78406 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.56□□□□□ -1.68
RAE1P78406 USP9YP5-201ENST00000511770 630 ntBASIC4.56□□□□□ -1.68
RAE1P78406 BTF3P13-201ENST00000513224 490 ntBASIC4.56□□□□□ -1.68
RAE1P78406 RNU6-513P-201ENST00000516104 104 ntBASIC4.56□□□□□ -1.68
RAE1P78406 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.56□□□□□ -1.68
RAE1P78406 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.56□□□□□ -1.68
RAE1P78406 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.56□□□□□ -1.68
RAE1P78406 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAE1P78406 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.56□□□□□ -1.68
RAE1P78406 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.56□□□□□ -1.68
RAE1P78406 RN7SL802P-201ENST00000577858 299 ntBASIC4.56□□□□□ -1.68
RAE1P78406 MIR5699-201ENST00000578903 90 ntBASIC4.56□□□□□ -1.68
RAE1P78406 AC119751.7-201ENST00000600494 245 ntBASIC4.56□□□□□ -1.68
RAE1P78406 AL445222.1-201ENST00000607259 628 ntBASIC4.56□□□□□ -1.68
RAE1P78406 AC024560.3-201ENST00000608482 349 ntBASIC4.56□□□□□ -1.68
RAE1P78406 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.56□□□□□ -1.68
RAE1P78406 AP001642.1-201ENST00000624727 2117 ntBASIC4.56□□□□□ -1.68
RAE1P78406 AL359922.3-201ENST00000624779 1670 ntBASIC4.56□□□□□ -1.68
RAE1P78406 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAE1P78406 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAE1P78406 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAE1P78406 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.56□□□□□ -1.68
RAE1P78406 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RAE1P78406 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RAE1P78406 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RAE1P78406 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.56□□□□□ -1.68
RAE1P78406 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAE1P78406 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.55□□□□□ -1.68
RAE1P78406 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.55□□□□□ -1.68
RAE1P78406 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RAE1P78406 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RAE1P78406 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.55□□□□□ -1.68
RAE1P78406 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.55□□□□□ -1.68
RAE1P78406 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAE1P78406 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RAE1P78406 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAE1P78406 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.55□□□□□ -1.68
RAE1P78406 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAE1P78406 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RAE1P78406 RNU4-21P-201ENST00000362802 126 ntBASIC4.55□□□□□ -1.68
RAE1P78406 Y_RNA.302-201ENST00000364997 102 ntBASIC4.55□□□□□ -1.68
RAE1P78406 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RAE1P78406 AC092642.1-201ENST00000392417 425 ntBASIC4.55□□□□□ -1.68
RAE1P78406 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAE1P78406 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.55□□□□□ -1.68
RAE1P78406 VDAC2P1-201ENST00000399358 958 ntBASIC4.55□□□□□ -1.68
RAE1P78406 TPMTP3-201ENST00000411928 735 ntBASIC4.55□□□□□ -1.68
RAE1P78406 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.55□□□□□ -1.68
RAE1P78406 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.55□□□□□ -1.68
RAE1P78406 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.55□□□□□ -1.68
RAE1P78406 SLC25A18P1-201ENST00000449385 454 ntBASIC4.55□□□□□ -1.68
RAE1P78406 RPL26P28-201ENST00000451325 435 ntBASIC4.55□□□□□ -1.68
RAE1P78406 AC010733.1-201ENST00000451515 401 ntBASIC4.55□□□□□ -1.68
RAE1P78406 OR6C5P-201ENST00000452388 923 ntBASIC4.55□□□□□ -1.68
RAE1P78406 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RAE1P78406 snoU13.20-201ENST00000459180 104 ntBASIC4.55□□□□□ -1.68
RAE1P78406 RNA5SP103-201ENST00000459503 118 ntBASIC4.55□□□□□ -1.68
RAE1P78406 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.55□□□□□ -1.68
RAE1P78406 RN7SL808P-201ENST00000496066 299 ntBASIC4.55□□□□□ -1.68
RAE1P78406 SNX5P1-201ENST00000505757 1041 ntBASIC4.55□□□□□ -1.68
RAE1P78406 GAPDHP56-201ENST00000506031 988 ntBASIC4.55□□□□□ -1.68
RAE1P78406 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.55□□□□□ -1.68
RAE1P78406 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.55□□□□□ -1.68
RAE1P78406 SOD1P3-201ENST00000518682 454 ntBASIC4.55□□□□□ -1.68
RAE1P78406 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
RAE1P78406 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RAE1P78406 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.55□□□□□ -1.68
RAE1P78406 AC008033.2-201ENST00000542626 177 ntBASIC4.55□□□□□ -1.68
RAE1P78406 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
RAE1P78406 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
RAE1P78406 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.55□□□□□ -1.68
RAE1P78406 AC012213.3-201ENST00000577199 777 ntBASIC4.55□□□□□ -1.68
RAE1P78406 AC022726.1-201ENST00000587475 207 ntBASIC4.55□□□□□ -1.68
RAE1P78406 AC008507.1-201ENST00000587506 734 ntBASIC4.55□□□□□ -1.68
RAE1P78406 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.55□□□□□ -1.68
RAE1P78406 AC087763.1-201ENST00000603391 286 ntBASIC4.55□□□□□ -1.68
RAE1P78406 AC116651.1-201ENST00000609724 556 ntBASIC4.55□□□□□ -1.68
RAE1P78406 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.55□□□□□ -1.68
RAE1P78406 AC091905.4-201ENST00000623432 202 ntBASIC4.55□□□□□ -1.68
RAE1P78406 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
RAE1P78406 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.55□□□□□ -1.68
RAE1P78406 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAE1P78406 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.55□□□□□ -1.68
RAE1P78406 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAE1P78406 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAE1P78406 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.55□□□□□ -1.68
RAE1P78406 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAE1P78406 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RAE1P78406 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAE1P78406 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.55□□□□□ -1.68
RAE1P78406 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAE1P78406 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAE1P78406 MTND4P5-201ENST00000435821 1374 ntBASIC4.54□□□□□ -1.68
RAE1P78406 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAE1P78406 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RAE1P78406 IRF5P1-201ENST00000504852 2164 ntBASIC4.54□□□□□ -1.68
RAE1P78406 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RAE1P78406 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.54□□□□□ -1.68
RAE1P78406 OR5BR1P-201ENST00000524992 1330 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms