Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC139713.2-210ENST00000641741 992 ntBASIC3.66□□□□□ -1.82
LMO4P61968 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LMO4P61968 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
LMO4P61968 AC026523.2-201ENST00000625039 7739 ntBASIC3.66□□□□□ -1.82
LMO4P61968 AC091046.3-201ENST00000631455 1574 ntBASIC3.66□□□□□ -1.82
LMO4P61968 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LMO4P61968 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LMO4P61968 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LMO4P61968 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.66□□□□□ -1.82
LMO4P61968 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.66□□□□□ -1.82
LMO4P61968 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC3.66□□□□□ -1.82
LMO4P61968 ASNSP1-201ENST00000518311 1939 ntBASIC3.66□□□□□ -1.82
LMO4P61968 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LMO4P61968 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
LMO4P61968 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LMO4P61968 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LMO4P61968 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.65□□□□□ -1.82
LMO4P61968 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.65□□□□□ -1.82
LMO4P61968 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
LMO4P61968 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
LMO4P61968 NXPH1-205ENST00000602349 1953 ntBASIC3.65□□□□□ -1.82
LMO4P61968 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LMO4P61968 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
LMO4P61968 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
LMO4P61968 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.65□□□□□ -1.82
LMO4P61968 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
LMO4P61968 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LMO4P61968 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.65□□□□□ -1.82
LMO4P61968 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
LMO4P61968 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LMO4P61968 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
LMO4P61968 AL133268.1-201ENST00000405676 1401 ntBASIC3.65□□□□□ -1.83
LMO4P61968 MTCO1P18-201ENST00000455518 1419 ntBASIC3.65□□□□□ -1.83
LMO4P61968 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LMO4P61968 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LMO4P61968 SNORD113-6-201ENST00000363345 75 ntBASIC3.65□□□□□ -1.83
LMO4P61968 Y_RNA.201-201ENST00000364052 96 ntBASIC3.65□□□□□ -1.83
LMO4P61968 RNU6-98P-201ENST00000384173 107 ntBASIC3.65□□□□□ -1.83
LMO4P61968 Y_RNA.578-201ENST00000390903 88 ntBASIC3.65□□□□□ -1.83
LMO4P61968 RPL31P52-201ENST00000407532 367 ntBASIC3.65□□□□□ -1.83
LMO4P61968 MIR1193-201ENST00000408109 78 ntBASIC3.65□□□□□ -1.83
LMO4P61968 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.65□□□□□ -1.83
LMO4P61968 AL356320.2-201ENST00000417263 507 ntBASIC3.65□□□□□ -1.83
LMO4P61968 EIF4A1P1-201ENST00000420241 934 ntBASIC3.65□□□□□ -1.83
LMO4P61968 AL358176.3-201ENST00000420757 454 ntBASIC3.65□□□□□ -1.83
LMO4P61968 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.65□□□□□ -1.83
LMO4P61968 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LMO4P61968 Z74021.1-201ENST00000423610 407 ntBASIC3.65□□□□□ -1.83
LMO4P61968 RPL21P91-201ENST00000429231 479 ntBASIC3.65□□□□□ -1.83
LMO4P61968 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.65□□□□□ -1.83
LMO4P61968 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.65□□□□□ -1.83
LMO4P61968 NANOGP2-201ENST00000435391 727 ntBASIC3.65□□□□□ -1.83
LMO4P61968 AL445567.1-201ENST00000439121 144 ntBASIC3.65□□□□□ -1.83
LMO4P61968 RPL23AP52-201ENST00000439311 478 ntBASIC3.65□□□□□ -1.83
LMO4P61968 MTND6P18-201ENST00000439477 513 ntBASIC3.65□□□□□ -1.83
LMO4P61968 UBE2V1P3-201ENST00000439651 417 ntBASIC3.65□□□□□ -1.83
LMO4P61968 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.65□□□□□ -1.83
LMO4P61968 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.65□□□□□ -1.83
LMO4P61968 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.65□□□□□ -1.83
LMO4P61968 MRPL35P4-201ENST00000453682 566 ntBASIC3.65□□□□□ -1.83
LMO4P61968 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.65□□□□□ -1.83
LMO4P61968 MTCO1P35-201ENST00000515270 228 ntBASIC3.65□□□□□ -1.83
LMO4P61968 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.65□□□□□ -1.83
LMO4P61968 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 AC090888.1-201ENST00000561335 1141 ntBASIC3.65□□□□□ -1.83
LMO4P61968 BNIP3P5-201ENST00000562290 498 ntBASIC3.65□□□□□ -1.83
LMO4P61968 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.65□□□□□ -1.83
LMO4P61968 RN7SL176P-201ENST00000580352 264 ntBASIC3.65□□□□□ -1.83
LMO4P61968 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.65□□□□□ -1.83
LMO4P61968 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO4P61968 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.65□□□□□ -1.83
LMO4P61968 AC008966.2-201ENST00000606157 453 ntBASIC3.65□□□□□ -1.83
LMO4P61968 AL583856.2-201ENST00000606298 543 ntBASIC3.65□□□□□ -1.83
LMO4P61968 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LMO4P61968 AC140479.6-201ENST00000633535 357 ntBASIC3.65□□□□□ -1.83
LMO4P61968 MIR1322-201ENST00000638013 71 ntBASIC3.65□□□□□ -1.83
LMO4P61968 AC103706.2-201ENST00000638080 240 ntBASIC3.65□□□□□ -1.83
LMO4P61968 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
LMO4P61968 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LMO4P61968 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
LMO4P61968 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.65□□□□□ -1.83
LMO4P61968 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.65□□□□□ -1.83
LMO4P61968 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LMO4P61968 AL731532.2-201ENST00000623542 1953 ntBASIC3.64□□□□□ -1.83
LMO4P61968 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.64□□□□□ -1.83
LMO4P61968 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
LMO4P61968 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms