Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC2.71□□□□□ -1.98
CKS1BP61024 RPS7P13-201ENST00000413955 498 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.71□□□□□ -1.98
CKS1BP61024 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CKS1BP61024 HSPE1P1-201ENST00000421494 318 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 AC241520.1-201ENST00000422654 1099 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.71□□□□□ -1.98
CKS1BP61024 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CKS1BP61024 AL360081.1-201ENST00000428299 555 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 USP9YP9-201ENST00000429406 715 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 VDAC1P3-201ENST00000434069 851 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 FTH1P16-201ENST00000435241 552 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 RPL12P3-201ENST00000440080 396 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 ARL5AP2-201ENST00000444698 533 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.71□□□□□ -1.98
CKS1BP61024 OR7L1P-201ENST00000456181 380 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 RPL38P1-201ENST00000460914 211 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 TSACC-207ENST00000470342 601 ntTSL 2 BASIC2.71□□□□□ -1.98
CKS1BP61024 AC087312.1-201ENST00000471411 480 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 AC117394.1-201ENST00000477323 567 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.71□□□□□ -1.98
CKS1BP61024 RPL31P61-201ENST00000496160 376 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.71□□□□□ -1.98
CKS1BP61024 AC114967.1-201ENST00000504890 259 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 RN7SKP92-201ENST00000517266 244 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.71□□□□□ -1.98
CKS1BP61024 TGIF1P1-201ENST00000558095 802 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC2.71□□□□□ -1.98
CKS1BP61024 AC010653.1-201ENST00000571108 881 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 AC090616.5-202ENST00000582111 297 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.71□□□□□ -1.98
CKS1BP61024 AC113194.1-201ENST00000606037 500 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 AL390240.1-201ENST00000612950 384 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CKS1BP61024 AC018445.2-201ENST00000622987 260 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 AL445363.3-201ENST00000623080 671 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 AC124312.6-202ENST00000623624 418 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 CCT5-215ENST00000625723 135 ntTSL 5 BASIC2.71□□□□□ -1.98
CKS1BP61024 WDR75-207ENST00000631047 270 ntTSL 5 BASIC2.71□□□□□ -1.98
CKS1BP61024 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.71□□□□□ -1.98
CKS1BP61024 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CKS1BP61024 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CKS1BP61024 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CKS1BP61024 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CKS1BP61024 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.71□□□□□ -1.98
CKS1BP61024 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CKS1BP61024 AC026951.1-201ENST00000559530 2459 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.7□□□□□ -1.98
CKS1BP61024 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
CKS1BP61024 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CKS1BP61024 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CKS1BP61024 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CKS1BP61024 XPOTP1-201ENST00000443317 2398 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
CKS1BP61024 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CKS1BP61024 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CKS1BP61024 AL583835.1-201ENST00000399570 407 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 AC011933.1-201ENST00000413334 321 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC2.7□□□□□ -1.98
CKS1BP61024 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC2.7□□□□□ -1.98
CKS1BP61024 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.7□□□□□ -1.98
CKS1BP61024 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC2.7□□□□□ -1.98
CKS1BP61024 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC2.7□□□□□ -1.98
CKS1BP61024 HIGD1AP4-201ENST00000430194 280 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 AC023347.2-201ENST00000433994 462 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 KCTD9P3-201ENST00000434597 1169 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 SETP8-201ENST00000435341 628 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 AC073264.2-201ENST00000448886 166 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.7□□□□□ -1.98
CKS1BP61024 TPMTP4-201ENST00000450749 678 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 snoU13.1-201ENST00000459157 104 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 AC116533.1-201ENST00000459748 321 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.7□□□□□ -1.98
CKS1BP61024 RNA5SP49-201ENST00000516450 115 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 RN7SKP83-201ENST00000516512 178 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.7□□□□□ -1.98
CKS1BP61024 AC068657.1-201ENST00000520807 306 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 AC239860.2-201ENST00000525886 270 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC2.7□□□□□ -1.98
CKS1BP61024 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.7□□□□□ -1.98
CKS1BP61024 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.7□□□□□ -1.98
CKS1BP61024 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC2.7□□□□□ -1.98
CKS1BP61024 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.7□□□□□ -1.98
CKS1BP61024 OR7E18P-201ENST00000592589 702 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 AC245128.3-201ENST00000594721 748 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 RPL12P25-202ENST00000598100 674 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC2.7□□□□□ -1.98
CKS1BP61024 AL392088.2-201ENST00000637607 285 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 AL139254.3-201ENST00000641097 674 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CKS1BP61024 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.7□□□□□ -1.98
CKS1BP61024 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CKS1BP61024 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CKS1BP61024 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.7□□□□□ -1.98
CKS1BP61024 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.7□□□□□ -1.98
CKS1BP61024 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CKS1BP61024 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CKS1BP61024 AC011978.2-201ENST00000569835 2054 ntBASIC2.69□□□□□ -1.98
CKS1BP61024 AC116667.1-201ENST00000604855 2072 ntBASIC2.69□□□□□ -1.98
CKS1BP61024 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms