Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AP003117.1-201ENST00000602771 554 ntBASIC3.34□□□□□ -1.87
ACTBP60709 ARF4P1-201ENST00000605447 541 ntBASIC3.34□□□□□ -1.87
ACTBP60709 AC055764.2-201ENST00000610089 670 ntBASIC3.34□□□□□ -1.87
ACTBP60709 AC011472.4-201ENST00000615848 491 ntBASIC3.34□□□□□ -1.87
ACTBP60709 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
ACTBP60709 PLCE1P1-201ENST00000622094 305 ntBASIC3.34□□□□□ -1.87
ACTBP60709 AC092184.1-201ENST00000625042 715 ntBASIC3.34□□□□□ -1.87
ACTBP60709 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.34□□□□□ -1.87
ACTBP60709 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.34□□□□□ -1.87
ACTBP60709 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
ACTBP60709 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
ACTBP60709 AC005261.4-201ENST00000600047 1385 ntBASIC3.34□□□□□ -1.88
ACTBP60709 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
ACTBP60709 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
ACTBP60709 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.34□□□□□ -1.88
ACTBP60709 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
ACTBP60709 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
ACTBP60709 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
ACTBP60709 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.34□□□□□ -1.88
ACTBP60709 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.34□□□□□ -1.88
ACTBP60709 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
ACTBP60709 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
ACTBP60709 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
ACTBP60709 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ACTBP60709 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ACTBP60709 OR6C69P-201ENST00000394268 893 ntBASIC3.33□□□□□ -1.88
ACTBP60709 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.33□□□□□ -1.88
ACTBP60709 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.33□□□□□ -1.88
ACTBP60709 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.33□□□□□ -1.88
ACTBP60709 AC007064.3-201ENST00000422608 359 ntBASIC3.33□□□□□ -1.88
ACTBP60709 AC002075.2-201ENST00000425207 252 ntBASIC3.33□□□□□ -1.88
ACTBP60709 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.33□□□□□ -1.88
ACTBP60709 RPL21P112-201ENST00000434403 463 ntBASIC3.33□□□□□ -1.88
ACTBP60709 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.33□□□□□ -1.88
ACTBP60709 HMGB1P12-201ENST00000438594 598 ntBASIC3.33□□□□□ -1.88
ACTBP60709 NPM1P49-201ENST00000448027 714 ntBASIC3.33□□□□□ -1.88
ACTBP60709 VN1R48P-201ENST00000448149 1036 ntBASIC3.33□□□□□ -1.88
ACTBP60709 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.33□□□□□ -1.88
ACTBP60709 MTND2P8-201ENST00000450555 1025 ntBASIC3.33□□□□□ -1.88
ACTBP60709 SLC31A1P1-201ENST00000451221 567 ntBASIC3.33□□□□□ -1.88
ACTBP60709 PTGES3P5-201ENST00000455109 434 ntBASIC3.33□□□□□ -1.88
ACTBP60709 AC104629.2-201ENST00000468627 598 ntBASIC3.33□□□□□ -1.88
ACTBP60709 RPS4XP13-201ENST00000483219 789 ntBASIC3.33□□□□□ -1.88
ACTBP60709 AC105137.1-201ENST00000484355 562 ntBASIC3.33□□□□□ -1.88
ACTBP60709 CDH12P2-201ENST00000504393 298 ntBASIC3.33□□□□□ -1.88
ACTBP60709 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.33□□□□□ -1.88
ACTBP60709 HPRT1P1-201ENST00000509498 657 ntBASIC3.33□□□□□ -1.88
ACTBP60709 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ACTBP60709 IGKV2D-10-201ENST00000520194 281 ntBASIC3.33□□□□□ -1.88
ACTBP60709 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.33□□□□□ -1.88
ACTBP60709 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.33□□□□□ -1.88
ACTBP60709 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.33□□□□□ -1.88
ACTBP60709 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.33□□□□□ -1.88
ACTBP60709 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.33□□□□□ -1.88
ACTBP60709 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.33□□□□□ -1.88
ACTBP60709 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.33□□□□□ -1.88
ACTBP60709 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.33□□□□□ -1.88
ACTBP60709 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.33□□□□□ -1.88
ACTBP60709 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.33□□□□□ -1.88
ACTBP60709 AC005156.1-201ENST00000613371 573 ntBASIC3.33□□□□□ -1.88
ACTBP60709 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.33□□□□□ -1.88
ACTBP60709 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ACTBP60709 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ACTBP60709 LARP1BP1-201ENST00000506036 1359 ntBASIC3.33□□□□□ -1.88
ACTBP60709 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.33□□□□□ -1.88
ACTBP60709 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
ACTBP60709 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ACTBP60709 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ACTBP60709 CCT8P1-201ENST00000413611 1657 ntBASIC3.33□□□□□ -1.88
ACTBP60709 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ACTBP60709 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
ACTBP60709 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ACTBP60709 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ACTBP60709 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
ACTBP60709 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
ACTBP60709 XKRYP4-201ENST00000414395 483 ntBASIC3.32□□□□□ -1.88
ACTBP60709 MTND2P16-201ENST00000419987 799 ntBASIC3.32□□□□□ -1.88
ACTBP60709 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.32□□□□□ -1.88
ACTBP60709 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.32□□□□□ -1.88
ACTBP60709 AL392003.1-201ENST00000434394 243 ntBASIC3.32□□□□□ -1.88
ACTBP60709 MTCO3P17-201ENST00000443775 513 ntBASIC3.32□□□□□ -1.88
ACTBP60709 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ACTBP60709 XKRYP5-201ENST00000449659 483 ntBASIC3.32□□□□□ -1.88
ACTBP60709 TRBV12-2-201ENST00000489763 344 ntBASIC3.32□□□□□ -1.88
ACTBP60709 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.32□□□□□ -1.88
ACTBP60709 AC026784.1-201ENST00000507986 352 ntBASIC3.32□□□□□ -1.88
ACTBP60709 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.32□□□□□ -1.88
ACTBP60709 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.32□□□□□ -1.88
ACTBP60709 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.32□□□□□ -1.88
ACTBP60709 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.32□□□□□ -1.88
ACTBP60709 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.32□□□□□ -1.88
ACTBP60709 AC010735.1-201ENST00000567305 1026 ntBASIC3.32□□□□□ -1.88
ACTBP60709 AC027281.1-201ENST00000574178 758 ntBASIC3.32□□□□□ -1.88
ACTBP60709 AC023575.1-201ENST00000580510 358 ntBASIC3.32□□□□□ -1.88
ACTBP60709 MIR3138-201ENST00000585238 82 ntBASIC3.32□□□□□ -1.88
ACTBP60709 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ACTBP60709 SNORA51-201ENST00000606420 132 ntBASIC3.32□□□□□ -1.88
ACTBP60709 AL592295.2-201ENST00000612578 206 ntBASIC3.32□□□□□ -1.88
ACTBP60709 AC245389.2-201ENST00000616023 576 ntBASIC3.32□□□□□ -1.88
ACTBP60709 AC243756.2-201ENST00000618406 463 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms