Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC069528.1-202ENST00000482888 637 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 IGBP1P5-201ENST00000507524 1000 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 snoZ278.1-201ENST00000517059 112 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 RN7SKP283-201ENST00000517197 270 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC4P56524 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.7□□□□□ -1.66
HDAC4P56524 CYCSP28-201ENST00000534284 321 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.7□□□□□ -1.66
HDAC4P56524 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC4P56524 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC4P56524 AC068313.1-201ENST00000604028 1008 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 AC009464.1-201ENST00000615731 469 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 AC055839.1-201ENST00000634467 498 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HDAC4P56524 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC4P56524 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.66
HDAC4P56524 AL049555.1-201ENST00000562834 1933 ntBASIC4.7□□□□□ -1.66
HDAC4P56524 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HDAC4P56524 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC4P56524 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HDAC4P56524 NXPH1-205ENST00000602349 1953 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC4P56524 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC4P56524 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC4P56524 RNU1-63P-201ENST00000383902 164 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
HDAC4P56524 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HDAC4P56524 AL450992.3-201ENST00000413192 568 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.69□□□□□ -1.66
HDAC4P56524 UQCRBP1-201ENST00000421129 336 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 AL513175.2-201ENST00000422071 443 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 RPS12P10-201ENST00000427031 377 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 RPL21P110-201ENST00000433345 446 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 HMGB3P6-201ENST00000444896 598 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.69□□□□□ -1.66
HDAC4P56524 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.69□□□□□ -1.66
HDAC4P56524 AL589880.1-201ENST00000448271 287 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.69□□□□□ -1.66
HDAC4P56524 RPL23AP2-201ENST00000471227 466 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 RPL30P11-201ENST00000495304 339 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.69□□□□□ -1.66
HDAC4P56524 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.69□□□□□ -1.66
HDAC4P56524 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.69□□□□□ -1.66
HDAC4P56524 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.69□□□□□ -1.66
HDAC4P56524 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.69□□□□□ -1.66
HDAC4P56524 MTCO3P15-201ENST00000526563 574 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.69□□□□□ -1.66
HDAC4P56524 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.69□□□□□ -1.66
HDAC4P56524 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC4P56524 NIFKP8-201ENST00000560500 874 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.69□□□□□ -1.66
HDAC4P56524 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.69□□□□□ -1.66
HDAC4P56524 AC015688.2-201ENST00000584523 262 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.69□□□□□ -1.66
HDAC4P56524 AL020997.2-201ENST00000602607 184 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 AC103792.1-201ENST00000603591 919 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 AC010201.1-201ENST00000605051 540 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 AC091979.2-201ENST00000607514 214 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 AL133243.1-201ENST00000614487 366 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 AC018926.3-201ENST00000618841 406 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HDAC4P56524 AC091905.2-201ENST00000623143 306 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 OR1S1-201ENST00000624470 978 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 AL049536.1-201ENST00000625043 744 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.69□□□□□ -1.66
HDAC4P56524 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.69□□□□□ -1.66
HDAC4P56524 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.69□□□□□ -1.66
HDAC4P56524 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC4P56524 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC4P56524 AL049737.1-201ENST00000413920 1403 ntBASIC4.69□□□□□ -1.66
HDAC4P56524 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC4P56524 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC4P56524 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC4P56524 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HDAC4P56524 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.68□□□□□ -1.66
HDAC4P56524 Z98755.1-201ENST00000407015 1384 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HDAC4P56524 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HDAC4P56524 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HDAC4P56524 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HDAC4P56524 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HDAC4P56524 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HDAC4P56524 MIR448-201ENST00000362131 111 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 RNU1-20P-201ENST00000363314 162 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 RNU4-68P-201ENST00000364314 141 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 RNU4-28P-201ENST00000364739 141 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 RNA5SP505-201ENST00000364748 108 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 GLULP6-201ENST00000399502 913 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AL136310.1-201ENST00000404926 654 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 RPL22P18-201ENST00000417197 377 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AC069213.2-201ENST00000420238 366 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AC005005.2-201ENST00000420779 380 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 AC004448.2-201ENST00000422360 586 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.68□□□□□ -1.66
HDAC4P56524 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.68□□□□□ -1.66
HDAC4P56524 RPEP3-201ENST00000425462 676 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.68□□□□□ -1.66
HDAC4P56524 AC016712.1-201ENST00000431088 378 ntBASIC4.68□□□□□ -1.66
HDAC4P56524 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.68□□□□□ -1.66
HDAC4P56524 UBE2V1P5-201ENST00000440070 405 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms