Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA1P56159 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA1P56159 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA1P56159 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA1P56159 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA1P56159 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.24□□□□□ -1.57
GFRA1P56159 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA1P56159 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.24□□□□□ -1.57
GFRA1P56159 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
GFRA1P56159 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA1P56159 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA1P56159 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA1P56159 AC010928.1-201ENST00000592477 1447 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA1P56159 AC068769.1-201ENST00000474767 2426 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA1P56159 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA1P56159 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.24□□□□□ -1.57
GFRA1P56159 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA1P56159 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
GFRA1P56159 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.24□□□□□ -1.57
GFRA1P56159 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA1P56159 RNU1-130P-201ENST00000363930 160 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA1P56159 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.24□□□□□ -1.57
GFRA1P56159 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA1P56159 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA1P56159 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.24□□□□□ -1.57
GFRA1P56159 JKAMPP1-201ENST00000413804 919 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 OR51A5P-201ENST00000415429 942 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 RPL36AP36-201ENST00000418616 301 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.24□□□□□ -1.57
GFRA1P56159 AC019097.1-201ENST00000424783 735 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA1P56159 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.24□□□□□ -1.57
GFRA1P56159 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.24□□□□□ -1.57
GFRA1P56159 AL161636.2-201ENST00000445179 927 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.24□□□□□ -1.57
GFRA1P56159 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.24□□□□□ -1.57
GFRA1P56159 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA1P56159 RPL23AP41-201ENST00000484754 458 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 TRBV5-2-201ENST00000489095 273 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 RPL23AP72-201ENST00000492447 435 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 RPS4XP18-201ENST00000495480 763 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 AC010587.1-201ENST00000505809 469 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.24□□□□□ -1.57
GFRA1P56159 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.24□□□□□ -1.57
GFRA1P56159 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.24□□□□□ -1.57
GFRA1P56159 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA1P56159 AC024224.1-201ENST00000538284 609 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.24□□□□□ -1.57
GFRA1P56159 CBX3P5-201ENST00000552017 521 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.24□□□□□ -1.57
GFRA1P56159 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.24□□□□□ -1.57
GFRA1P56159 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA1P56159 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.24□□□□□ -1.57
GFRA1P56159 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA1P56159 AL356055.1-201ENST00000602528 446 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 AL009028.1-201ENST00000604895 802 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 AC093788.1-201ENST00000609356 927 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 AC069234.4-201ENST00000621276 412 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 AC006065.6-201ENST00000625201 545 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA1P56159 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA1P56159 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.24□□□□□ -1.57
GFRA1P56159 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA1P56159 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA1P56159 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA1P56159 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
GFRA1P56159 AC005224.3-201ENST00000584683 2140 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA1P56159 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
GFRA1P56159 PHKBP1-201ENST00000450951 1951 ntBASIC5.24□□□□□ -1.57
GFRA1P56159 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.24□□□□□ -1.57
GFRA1P56159 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 AC006210.2-201ENST00000367074 1545 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 AL591135.1-201ENST00000401578 5914 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
GFRA1P56159 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GFRA1P56159 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
GFRA1P56159 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
GFRA1P56159 Y_RNA.61-201ENST00000362835 102 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 RNY1P12-201ENST00000364251 105 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 RN7SKP78-201ENST00000364711 318 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 SNORA20.2-201ENST00000383922 131 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 RNU6-1207P-201ENST00000384343 107 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 RNU6-456P-201ENST00000384493 107 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 RPL23AP17-201ENST00000401064 499 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AL356776.1-201ENST00000406574 447 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.23□□□□□ -1.57
GFRA1P56159 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.23□□□□□ -1.57
GFRA1P56159 SDHDP6-201ENST00000414693 480 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 SLC35E1P1-201ENST00000419313 864 ntBASIC5.23□□□□□ -1.57
GFRA1P56159 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms