Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH11P55287 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH11P55287 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH11P55287 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH11P55287 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH11P55287 AC044913.1-201ENST00000557200 430 ntBASIC4.08□□□□□ -1.76
CDH11P55287 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH11P55287 DHX40P1-201ENST00000588725 1412 ntBASIC4.08□□□□□ -1.76
CDH11P55287 AL357094.1-201ENST00000603845 844 ntBASIC4.08□□□□□ -1.76
CDH11P55287 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH11P55287 AP004247.3-201ENST00000608682 624 ntBASIC4.08□□□□□ -1.76
CDH11P55287 AC092106.3-201ENST00000611308 722 ntBASIC4.08□□□□□ -1.76
CDH11P55287 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH11P55287 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH11P55287 MIR6810-201ENST00000622701 70 ntBASIC4.08□□□□□ -1.76
CDH11P55287 AC116563.2-201ENST00000624751 535 ntBASIC4.08□□□□□ -1.76
CDH11P55287 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH11P55287 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH11P55287 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CDH11P55287 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH11P55287 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH11P55287 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH11P55287 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH11P55287 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH11P55287 KARSP3-201ENST00000571212 1504 ntBASIC4.07□□□□□ -1.76
CDH11P55287 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDH11P55287 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CDH11P55287 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH11P55287 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDH11P55287 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.07□□□□□ -1.76
CDH11P55287 snoZ40.1-201ENST00000364540 72 ntBASIC4.07□□□□□ -1.76
CDH11P55287 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH11P55287 ELOCP9-201ENST00000418624 239 ntBASIC4.07□□□□□ -1.76
CDH11P55287 AC140479.3-201ENST00000418944 1126 ntBASIC4.07□□□□□ -1.76
CDH11P55287 NPM1P24-201ENST00000428039 894 ntBASIC4.07□□□□□ -1.76
CDH11P55287 AC016712.1-201ENST00000431088 378 ntBASIC4.07□□□□□ -1.76
CDH11P55287 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH11P55287 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH11P55287 AL357520.1-201ENST00000441557 453 ntBASIC4.07□□□□□ -1.76
CDH11P55287 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH11P55287 AL591719.1-201ENST00000444669 744 ntBASIC4.07□□□□□ -1.76
CDH11P55287 AC099063.2-201ENST00000446360 662 ntBASIC4.07□□□□□ -1.76
CDH11P55287 TPT1P12-201ENST00000448968 492 ntBASIC4.07□□□□□ -1.76
CDH11P55287 MTND1P31-201ENST00000449206 961 ntBASIC4.07□□□□□ -1.76
CDH11P55287 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH11P55287 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.07□□□□□ -1.76
CDH11P55287 RPL37P3-201ENST00000456825 293 ntBASIC4.07□□□□□ -1.76
CDH11P55287 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH11P55287 AC104689.1-201ENST00000473356 768 ntBASIC4.07□□□□□ -1.76
CDH11P55287 AC104763.1-201ENST00000475274 360 ntBASIC4.07□□□□□ -1.76
CDH11P55287 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.07□□□□□ -1.76
CDH11P55287 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH11P55287 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH11P55287 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH11P55287 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH11P55287 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH11P55287 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH11P55287 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH11P55287 OR4C2P-201ENST00000530855 1064 ntBASIC4.07□□□□□ -1.76
CDH11P55287 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH11P55287 AC004217.3-201ENST00000551552 878 ntBASIC4.07□□□□□ -1.76
CDH11P55287 OR4U1P-201ENST00000554958 912 ntBASIC4.07□□□□□ -1.76
CDH11P55287 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH11P55287 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH11P55287 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH11P55287 MIR4697-201ENST00000582977 78 ntBASIC4.07□□□□□ -1.76
CDH11P55287 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH11P55287 AP001542.2-201ENST00000593141 364 ntBASIC4.07□□□□□ -1.76
CDH11P55287 VN1R84P-201ENST00000593697 235 ntBASIC4.07□□□□□ -1.76
CDH11P55287 AC090181.2-201ENST00000602975 672 ntBASIC4.07□□□□□ -1.76
CDH11P55287 AC123786.2-201ENST00000603459 275 ntBASIC4.07□□□□□ -1.76
CDH11P55287 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH11P55287 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH11P55287 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH11P55287 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.07□□□□□ -1.76
CDH11P55287 AC087821.2-201ENST00000637086 450 ntBASIC4.07□□□□□ -1.76
CDH11P55287 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDH11P55287 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH11P55287 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH11P55287 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CDH11P55287 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CDH11P55287 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CDH11P55287 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH11P55287 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH11P55287 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH11P55287 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH11P55287 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH11P55287 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH11P55287 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH11P55287 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH11P55287 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH11P55287 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH11P55287 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH11P55287 RNU1-15P-201ENST00000353977 144 ntBASIC4.06□□□□□ -1.76
CDH11P55287 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CDH11P55287 RNA5SP52-201ENST00000362448 134 ntBASIC4.06□□□□□ -1.76
CDH11P55287 RNU6-984P-201ENST00000363236 109 ntBASIC4.06□□□□□ -1.76
CDH11P55287 SNORD113.2-201ENST00000364166 89 ntBASIC4.06□□□□□ -1.76
CDH11P55287 SNORD116.1-201ENST00000365628 92 ntBASIC4.06□□□□□ -1.76
CDH11P55287 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms