Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ZNF876P-202ENST00000398732 1485 ntBASIC4.6□□□□□ -1.67
NR1H2P55055 PABPC1P7-201ENST00000413177 1513 ntBASIC4.6□□□□□ -1.67
NR1H2P55055 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NR1H2P55055 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NR1H2P55055 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
NR1H2P55055 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NR1H2P55055 Y_RNA.25-201ENST00000362528 102 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 RNU1-130P-201ENST00000363930 160 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.59□□□□□ -1.67
NR1H2P55055 MIR600-201ENST00000385007 98 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AL109941.1-201ENST00000401925 229 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 NUDT19P3-201ENST00000404698 555 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 RPL23AP47-201ENST00000408017 460 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 U3.35-201ENST00000408405 208 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.59□□□□□ -1.67
NR1H2P55055 MTND4P22-201ENST00000413116 1169 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 ATG4AP1-201ENST00000416893 538 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 HMGB1P49-201ENST00000418882 569 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 RPS12P23-201ENST00000419579 400 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 RGS17P1-201ENST00000423358 553 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AC010099.3-201ENST00000423896 409 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 SDCBPP2-201ENST00000424643 885 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.59□□□□□ -1.67
NR1H2P55055 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.59□□□□□ -1.67
NR1H2P55055 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.59□□□□□ -1.67
NR1H2P55055 H2AFZP5-201ENST00000446960 382 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.59□□□□□ -1.67
NR1H2P55055 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.59□□□□□ -1.67
NR1H2P55055 AC108463.1-201ENST00000450258 347 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 IGHV5-78-201ENST00000450948 295 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 CEACAMP6-201ENST00000452007 574 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.59□□□□□ -1.67
NR1H2P55055 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
NR1H2P55055 AC009127.1-201ENST00000467090 155 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AC006967.1-201ENST00000467608 589 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 RPS26P28-201ENST00000470806 348 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 RPL23AP65-201ENST00000475608 468 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.59□□□□□ -1.67
NR1H2P55055 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.59□□□□□ -1.67
NR1H2P55055 AC091951.3-201ENST00000504093 246 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.59□□□□□ -1.67
NR1H2P55055 AC107982.1-201ENST00000507171 1300 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.59□□□□□ -1.67
NR1H2P55055 NDUFB4P12-201ENST00000513465 390 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 MRPS36P3-201ENST00000519284 130 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 MTND2P38-201ENST00000522536 667 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.59□□□□□ -1.67
NR1H2P55055 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.59□□□□□ -1.67
NR1H2P55055 MTCO2P15-201ENST00000532655 656 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AC005832.3-201ENST00000537929 631 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.59□□□□□ -1.67
NR1H2P55055 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.59□□□□□ -1.67
NR1H2P55055 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.59□□□□□ -1.67
NR1H2P55055 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NR1H2P55055 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.59□□□□□ -1.67
NR1H2P55055 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.59□□□□□ -1.67
NR1H2P55055 SNORD39.3-201ENST00000584451 71 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.59□□□□□ -1.67
NR1H2P55055 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.59□□□□□ -1.67
NR1H2P55055 NIFKP6-201ENST00000598115 845 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AC005084.1-201ENST00000605160 304 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.59□□□□□ -1.67
NR1H2P55055 AC007349.4-201ENST00000608114 532 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AP005432.2-201ENST00000608162 586 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 FAM25E-202ENST00000608562 189 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NR1H2P55055 EIF3FP1-201ENST00000613970 806 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 AL353662.3-201ENST00000625131 237 ntBASIC4.59□□□□□ -1.67
NR1H2P55055 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.59□□□□□ -1.67
NR1H2P55055 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.59□□□□□ -1.67
NR1H2P55055 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
NR1H2P55055 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.59□□□□□ -1.68
NR1H2P55055 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NR1H2P55055 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NR1H2P55055 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.58□□□□□ -1.68
NR1H2P55055 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NR1H2P55055 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NR1H2P55055 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NR1H2P55055 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.58□□□□□ -1.68
NR1H2P55055 MAPK10-263ENST00000641052 4307 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.58□□□□□ -1.68
NR1H2P55055 RNU6-1279P-201ENST00000383917 103 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 MIR124-3-201ENST00000384866 87 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NR1H2P55055 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NR1H2P55055 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.58□□□□□ -1.68
NR1H2P55055 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.58□□□□□ -1.68
NR1H2P55055 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.58□□□□□ -1.68
NR1H2P55055 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.58□□□□□ -1.68
NR1H2P55055 DDX39BP1-205ENST00000422507 192 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 RPL7P44-201ENST00000424827 742 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 VDAC1P6-201ENST00000430062 855 ntBASIC4.58□□□□□ -1.68
NR1H2P55055 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.58□□□□□ -1.68
NR1H2P55055 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.58□□□□□ -1.68
NR1H2P55055 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.58□□□□□ -1.68
NR1H2P55055 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.58□□□□□ -1.68
NR1H2P55055 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.58□□□□□ -1.68
NR1H2P55055 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.58□□□□□ -1.68
NR1H2P55055 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms