Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CLCNKAP51800 OR1L1-202ENST00000373686 1083 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 SNORA40.2-201ENST00000390847 128 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCNKAP51800 RNU6-575P-201ENST00000411326 105 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 AL592293.2-201ENST00000422292 996 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCNKAP51800 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCNKAP51800 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCNKAP51800 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.4□□□□□ -1.71
CLCNKAP51800 PPIAP13-201ENST00000434706 478 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 ARL4AP3-201ENST00000441452 574 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 YWHAQP9-201ENST00000445891 512 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 MTATP6P26-201ENST00000445926 662 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 MTCYBP11-201ENST00000447254 1109 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCNKAP51800 AC012671.1-201ENST00000451912 203 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCNKAP51800 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.4□□□□□ -1.71
CLCNKAP51800 RN7SL810P-201ENST00000493031 276 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 AC084024.2-201ENST00000503480 791 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCNKAP51800 AC119751.5-201ENST00000514077 770 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 AC023632.1-201ENST00000518463 375 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCNKAP51800 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCNKAP51800 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCNKAP51800 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCNKAP51800 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.4□□□□□ -1.71
CLCNKAP51800 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLCNKAP51800 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.4□□□□□ -1.71
CLCNKAP51800 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.4□□□□□ -1.71
CLCNKAP51800 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCNKAP51800 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCNKAP51800 IMMP1LP1-201ENST00000605170 488 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 AC008966.2-201ENST00000606157 453 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 AC091979.2-201ENST00000607514 214 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.4□□□□□ -1.71
CLCNKAP51800 MIR378J-201ENST00000611988 109 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 MIR6891-201ENST00000618788 93 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 AC092608.3-201ENST00000625017 386 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.4□□□□□ -1.71
CLCNKAP51800 AC006042.3-201ENST00000454684 1469 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 AL139811.1-201ENST00000424779 2299 ntBASIC4.4□□□□□ -1.71
CLCNKAP51800 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLCNKAP51800 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLCNKAP51800 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.4□□□□□ -1.71
CLCNKAP51800 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CLCNKAP51800 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.4□□□□□ -1.71
CLCNKAP51800 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCNKAP51800 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCNKAP51800 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCNKAP51800 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCNKAP51800 SAGE2P-201ENST00000420011 2126 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
CLCNKAP51800 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCNKAP51800 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCNKAP51800 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCNKAP51800 OR5P1P-201ENST00000299512 925 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCNKAP51800 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCNKAP51800 SNORD116.1-201ENST00000365628 92 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 U3.22-201ENST00000391120 215 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCNKAP51800 AL590290.1-201ENST00000405336 380 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCNKAP51800 SNRPFP1-201ENST00000414761 252 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 TMSB10P2-201ENST00000416049 131 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCNKAP51800 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCNKAP51800 HMGB1P49-201ENST00000418882 569 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCNKAP51800 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCNKAP51800 AC062016.2-201ENST00000420950 676 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 NIPA2P1-201ENST00000426223 976 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 OR5AW1P-201ENST00000426334 1006 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCNKAP51800 RPL21P91-201ENST00000429231 479 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCNKAP51800 AC233982.1-201ENST00000451247 436 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCNKAP51800 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCNKAP51800 PRDX3P4-201ENST00000470828 747 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 AL161747.1-201ENST00000480068 358 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCNKAP51800 RPS4XP18-201ENST00000495480 763 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCNKAP51800 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCNKAP51800 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCNKAP51800 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLCNKAP51800 AC092747.2-201ENST00000545069 983 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLCNKAP51800 AC145350.1-201ENST00000567426 208 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.39□□□□□ -1.71
CLCNKAP51800 AP001269.3-201ENST00000588718 329 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.39□□□□□ -1.71
CLCNKAP51800 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.39□□□□□ -1.71
CLCNKAP51800 VN1R88P-201ENST00000596787 292 ntBASIC4.39□□□□□ -1.71
CLCNKAP51800 AC092954.1-201ENST00000609121 445 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms