Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CENPAP49450 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CENPAP49450 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CENPAP49450 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CENPAP49450 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CENPAP49450 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CENPAP49450 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CENPAP49450 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CENPAP49450 RNU6-115P-201ENST00000364310 107 ntBASIC4.4□□□□□ -1.71
CENPAP49450 U3.15-201ENST00000365398 212 ntBASIC4.4□□□□□ -1.71
CENPAP49450 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CENPAP49450 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.4□□□□□ -1.71
CENPAP49450 AL512422.1-201ENST00000407033 553 ntBASIC4.4□□□□□ -1.71
CENPAP49450 AL136133.1-201ENST00000413694 376 ntBASIC4.4□□□□□ -1.71
CENPAP49450 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.4□□□□□ -1.71
CENPAP49450 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.4□□□□□ -1.71
CENPAP49450 AC009518.2-201ENST00000418056 731 ntBASIC4.4□□□□□ -1.71
CENPAP49450 BOLA3P4-201ENST00000418151 400 ntBASIC4.4□□□□□ -1.71
CENPAP49450 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.4□□□□□ -1.71
CENPAP49450 CHEK2P5-201ENST00000423877 246 ntBASIC4.4□□□□□ -1.71
CENPAP49450 AL031736.2-201ENST00000426573 787 ntBASIC4.4□□□□□ -1.71
CENPAP49450 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.4□□□□□ -1.71
CENPAP49450 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
CENPAP49450 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.4□□□□□ -1.71
CENPAP49450 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.4□□□□□ -1.71
CENPAP49450 RPS26P2-201ENST00000440331 348 ntBASIC4.4□□□□□ -1.71
CENPAP49450 MTND5P2-201ENST00000442927 1142 ntBASIC4.4□□□□□ -1.71
CENPAP49450 RPL12P26-201ENST00000452430 487 ntBASIC4.4□□□□□ -1.71
CENPAP49450 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.4□□□□□ -1.71
CENPAP49450 AL109741.2-201ENST00000455561 343 ntBASIC4.4□□□□□ -1.71
CENPAP49450 RPS15AP1-201ENST00000457423 391 ntBASIC4.4□□□□□ -1.71
CENPAP49450 NF1P3-201ENST00000457709 450 ntBASIC4.4□□□□□ -1.71
CENPAP49450 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.4□□□□□ -1.71
CENPAP49450 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.4□□□□□ -1.71
CENPAP49450 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
CENPAP49450 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.4□□□□□ -1.71
CENPAP49450 RPL23AP2-201ENST00000471227 466 ntBASIC4.4□□□□□ -1.71
CENPAP49450 RPL5P23-201ENST00000496040 868 ntBASIC4.4□□□□□ -1.71
CENPAP49450 RN7SL101P-201ENST00000496350 279 ntBASIC4.4□□□□□ -1.71
CENPAP49450 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.4□□□□□ -1.71
CENPAP49450 AC104090.1-201ENST00000506341 1171 ntBASIC4.4□□□□□ -1.71
CENPAP49450 HIGD1AP14-201ENST00000507617 282 ntBASIC4.4□□□□□ -1.71
CENPAP49450 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.4□□□□□ -1.71
CENPAP49450 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CENPAP49450 COX6B1P5-201ENST00000509843 249 ntBASIC4.4□□□□□ -1.71
CENPAP49450 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.4□□□□□ -1.71
CENPAP49450 RNU6-488P-201ENST00000515918 99 ntBASIC4.4□□□□□ -1.71
CENPAP49450 Y_RNA.688-201ENST00000516565 95 ntBASIC4.4□□□□□ -1.71
CENPAP49450 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
CENPAP49450 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CENPAP49450 OR11J2P-201ENST00000555298 907 ntBASIC4.4□□□□□ -1.71
CENPAP49450 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.4□□□□□ -1.71
CENPAP49450 OR4K7P-201ENST00000580232 945 ntBASIC4.4□□□□□ -1.71
CENPAP49450 AC022069.1-201ENST00000582910 658 ntBASIC4.4□□□□□ -1.71
CENPAP49450 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.4□□□□□ -1.71
CENPAP49450 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.4□□□□□ -1.71
CENPAP49450 RPL26P30-202ENST00000602923 645 ntBASIC4.4□□□□□ -1.71
CENPAP49450 Z99497.2-201ENST00000603634 310 ntBASIC4.4□□□□□ -1.71
CENPAP49450 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.4□□□□□ -1.71
CENPAP49450 AP000894.4-201ENST00000610185 483 ntBASIC4.4□□□□□ -1.71
CENPAP49450 AC005332.6-201ENST00000613178 446 ntBASIC4.4□□□□□ -1.71
CENPAP49450 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CENPAP49450 AC073348.1-201ENST00000623002 331 ntBASIC4.4□□□□□ -1.71
CENPAP49450 AC026422.1-201ENST00000623961 452 ntBASIC4.4□□□□□ -1.71
CENPAP49450 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.4□□□□□ -1.71
CENPAP49450 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CENPAP49450 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CENPAP49450 SGO1P2-201ENST00000429458 1589 ntBASIC4.4□□□□□ -1.71
CENPAP49450 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CENPAP49450 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CENPAP49450 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.39□□□□□ -1.71
CENPAP49450 THAP12P4-201ENST00000528321 2266 ntBASIC4.39□□□□□ -1.71
CENPAP49450 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CENPAP49450 AC009643.2-201ENST00000603543 1448 ntBASIC4.39□□□□□ -1.71
CENPAP49450 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CENPAP49450 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CENPAP49450 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CENPAP49450 RPL23P2-201ENST00000320371 421 ntBASIC4.39□□□□□ -1.71
CENPAP49450 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.39□□□□□ -1.71
CENPAP49450 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.39□□□□□ -1.71
CENPAP49450 Y_RNA.408-201ENST00000383987 102 ntBASIC4.39□□□□□ -1.71
CENPAP49450 ATP5F1P3-201ENST00000397213 657 ntBASIC4.39□□□□□ -1.71
CENPAP49450 RSL24D1P4-201ENST00000400938 484 ntBASIC4.39□□□□□ -1.71
CENPAP49450 U3.35-201ENST00000408405 208 ntBASIC4.39□□□□□ -1.71
CENPAP49450 MIR1183-201ENST00000408856 89 ntBASIC4.39□□□□□ -1.71
CENPAP49450 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.39□□□□□ -1.71
CENPAP49450 RNU4-72P-201ENST00000410754 173 ntBASIC4.39□□□□□ -1.71
CENPAP49450 AL160275.2-201ENST00000412010 394 ntBASIC4.39□□□□□ -1.71
CENPAP49450 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.39□□□□□ -1.71
CENPAP49450 MTND4P20-201ENST00000424125 869 ntBASIC4.39□□□□□ -1.71
CENPAP49450 AL513175.1-201ENST00000431492 780 ntBASIC4.39□□□□□ -1.71
CENPAP49450 AL050321.1-201ENST00000432363 400 ntBASIC4.39□□□□□ -1.71
CENPAP49450 AC010881.1-201ENST00000433830 235 ntBASIC4.39□□□□□ -1.71
CENPAP49450 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.39□□□□□ -1.71
CENPAP49450 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.39□□□□□ -1.71
CENPAP49450 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.39□□□□□ -1.71
CENPAP49450 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.39□□□□□ -1.71
CENPAP49450 AL137845.2-201ENST00000444292 988 ntBASIC4.39□□□□□ -1.71
CENPAP49450 AL163193.1-201ENST00000444895 788 ntBASIC4.39□□□□□ -1.71
CENPAP49450 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms