Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL158163.2-201ENST00000619110 700 ntBASIC3.84□□□□□ -1.79
CDX1P47902 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.84□□□□□ -1.79
CDX1P47902 AC091953.3-201ENST00000623220 236 ntBASIC3.84□□□□□ -1.79
CDX1P47902 AC026634.1-201ENST00000634369 198 ntBASIC3.84□□□□□ -1.79
CDX1P47902 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.84□□□□□ -1.79
CDX1P47902 LINC02211-204ENST00000642024 1070 ntBASIC3.84□□□□□ -1.79
CDX1P47902 DCAF13P1-201ENST00000495256 1330 ntBASIC3.84□□□□□ -1.79
CDX1P47902 DDX18P5-201ENST00000534547 1306 ntBASIC3.84□□□□□ -1.79
CDX1P47902 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDX1P47902 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDX1P47902 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDX1P47902 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDX1P47902 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.84□□□□□ -1.8
CDX1P47902 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CDX1P47902 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CDX1P47902 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CDX1P47902 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDX1P47902 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDX1P47902 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.83□□□□□ -1.8
CDX1P47902 AC016588.2-201ENST00000632484 3021 ntBASIC3.83□□□□□ -1.8
CDX1P47902 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.83□□□□□ -1.8
CDX1P47902 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDX1P47902 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.83□□□□□ -1.8
CDX1P47902 SNORA40.2-201ENST00000390847 128 ntBASIC3.83□□□□□ -1.8
CDX1P47902 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDX1P47902 LRRC37BP1-201ENST00000398851 714 ntBASIC3.83□□□□□ -1.8
CDX1P47902 RPL37P18-201ENST00000411602 243 ntBASIC3.83□□□□□ -1.8
CDX1P47902 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.83□□□□□ -1.8
CDX1P47902 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.83□□□□□ -1.8
CDX1P47902 MTATP6P20-201ENST00000414147 562 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.83□□□□□ -1.8
CDX1P47902 AC007435.1-201ENST00000421086 415 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AC092648.1-201ENST00000425870 423 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AL049745.1-201ENST00000433953 286 ntBASIC3.83□□□□□ -1.8
CDX1P47902 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CDX1P47902 AC008072.1-201ENST00000434254 824 ntBASIC3.83□□□□□ -1.8
CDX1P47902 USP9YP24-201ENST00000434374 697 ntBASIC3.83□□□□□ -1.8
CDX1P47902 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.83□□□□□ -1.8
CDX1P47902 USP9YP17-201ENST00000444617 696 ntBASIC3.83□□□□□ -1.8
CDX1P47902 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.83□□□□□ -1.8
CDX1P47902 AL589880.1-201ENST00000448271 287 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AL034418.1-201ENST00000448675 860 ntBASIC3.83□□□□□ -1.8
CDX1P47902 TPT1P13-201ENST00000449760 499 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AL009048.1-201ENST00000450437 298 ntBASIC3.83□□□□□ -1.8
CDX1P47902 NDUFS5P3-201ENST00000450668 321 ntBASIC3.83□□□□□ -1.8
CDX1P47902 SNORD108-201ENST00000459332 71 ntBASIC3.83□□□□□ -1.8
CDX1P47902 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
CDX1P47902 AC010307.1-201ENST00000467206 836 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AC146507.1-201ENST00000468335 354 ntBASIC3.83□□□□□ -1.8
CDX1P47902 RPL23AP44-201ENST00000482216 473 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AC108145.1-201ENST00000503770 153 ntBASIC3.83□□□□□ -1.8
CDX1P47902 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.83□□□□□ -1.8
CDX1P47902 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.83□□□□□ -1.8
CDX1P47902 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.83□□□□□ -1.8
CDX1P47902 MRPS33P2-201ENST00000507850 322 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.83□□□□□ -1.8
CDX1P47902 AC005798.1-201ENST00000513715 387 ntBASIC3.83□□□□□ -1.8
CDX1P47902 SNORA48.10-201ENST00000516965 160 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.83□□□□□ -1.8
CDX1P47902 IGKV1-32-201ENST00000519290 311 ntBASIC3.83□□□□□ -1.8
CDX1P47902 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.83□□□□□ -1.8
CDX1P47902 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.83□□□□□ -1.8
CDX1P47902 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDX1P47902 GTF2IP8-201ENST00000560687 584 ntBASIC3.83□□□□□ -1.8
CDX1P47902 MTND1P8-201ENST00000571424 950 ntBASIC3.83□□□□□ -1.8
CDX1P47902 MIR4700-201ENST00000578311 74 ntBASIC3.83□□□□□ -1.8
CDX1P47902 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.83□□□□□ -1.8
CDX1P47902 VN1R83P-201ENST00000595685 445 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AC104785.1-201ENST00000603220 588 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AL031320.1-201ENST00000604177 357 ntBASIC3.83□□□□□ -1.8
CDX1P47902 COX6CP4-201ENST00000605798 228 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.83□□□□□ -1.8
CDX1P47902 RNU4-5P-201ENST00000607255 135 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.83□□□□□ -1.8
CDX1P47902 AL445423.1-201ENST00000609941 536 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AL121895.2-201ENST00000619558 447 ntBASIC3.83□□□□□ -1.8
CDX1P47902 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.83□□□□□ -1.8
CDX1P47902 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.83□□□□□ -1.8
CDX1P47902 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.83□□□□□ -1.8
CDX1P47902 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDX1P47902 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDX1P47902 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDX1P47902 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDX1P47902 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDX1P47902 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.83□□□□□ -1.8
CDX1P47902 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CDX1P47902 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDX1P47902 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDX1P47902 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDX1P47902 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.82□□□□□ -1.8
CDX1P47902 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDX1P47902 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDX1P47902 SNORA73.1-201ENST00000363107 205 ntBASIC3.82□□□□□ -1.8
CDX1P47902 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.82□□□□□ -1.8
CDX1P47902 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDX1P47902 MIR585-201ENST00000384887 94 ntBASIC3.82□□□□□ -1.8
CDX1P47902 MIR513A2-201ENST00000385249 127 ntBASIC3.82□□□□□ -1.8
CDX1P47902 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CDX1P47902 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CDX1P47902 AL136310.1-201ENST00000404926 654 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms