Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 BOLA3P4-201ENST00000418151 400 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-1P43699 CENPIP1-201ENST00000425713 902 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-1P43699 RPL23AP25-201ENST00000430973 463 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 AC005345.1-201ENST00000431868 217 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX2-1P43699 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 AC093155.1-201ENST00000440164 826 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 RPL34P20-201ENST00000442771 351 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 AC092647.2-201ENST00000452998 253 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 USP9YP25-201ENST00000457708 443 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 RN7SL172P-201ENST00000460535 303 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 RPL5P30-201ENST00000465511 891 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX2-1P43699 RPS4XP1-201ENST00000482189 787 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 ACTG1P13-201ENST00000486987 1043 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 RN7SL30P-201ENST00000488416 306 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 AC025164.1-201ENST00000496249 478 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-1P43699 SNORA3.4-201ENST00000515969 96 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 AP000790.1-201ENST00000528891 737 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 PTP4A1P6-201ENST00000531034 478 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 AP000619.3-201ENST00000535634 1127 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX2-1P43699 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.81□□□□□ -1.8
NKX2-1P43699 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX2-1P43699 AL354943.1-201ENST00000572103 781 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.81□□□□□ -1.8
NKX2-1P43699 MIR4458-201ENST00000578872 75 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 MIR3176-201ENST00000582210 90 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.81□□□□□ -1.8
NKX2-1P43699 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX2-1P43699 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX2-1P43699 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NKX2-1P43699 AC113194.1-201ENST00000606037 500 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX2-1P43699 AC005332.6-201ENST00000613178 446 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 AL591926.8-201ENST00000616876 211 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 AC048344.4-201ENST00000619744 527 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NKX2-1P43699 AC098679.5-201ENST00000624394 571 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX2-1P43699 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX2-1P43699 MKKS-204ENST00000639674 192 ntBASIC3.81□□□□□ -1.8
NKX2-1P43699 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.81□□□□□ -1.8
NKX2-1P43699 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NKX2-1P43699 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NKX2-1P43699 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NKX2-1P43699 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NKX2-1P43699 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
NKX2-1P43699 OR51H2P-202ENST00000641424 3046 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NKX2-1P43699 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-1P43699 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NKX2-1P43699 FAM133CP-201ENST00000332869 704 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 MIR448-201ENST00000362131 111 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 RNU6-621P-201ENST00000364752 109 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 RNA5SP22-201ENST00000365393 109 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NKX2-1P43699 SNORD116-8-201ENST00000384365 95 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 ENSAP1-201ENST00000392855 326 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.8□□□□□ -1.8
NKX2-1P43699 GLULP6-201ENST00000399502 913 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 RSL24D1P4-201ENST00000400938 484 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 AL121834.1-202ENST00000404494 277 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 DPPA2P3-201ENST00000411853 655 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-1P43699 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NKX2-1P43699 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.8□□□□□ -1.8
NKX2-1P43699 AL008987.1-201ENST00000415528 237 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-1P43699 RBMY2KP-201ENST00000418221 992 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 COX6CP15-201ENST00000426313 211 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 RPL36P19-201ENST00000430744 301 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 MOB1AP1-201ENST00000430903 535 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 MTND1P32-201ENST00000433043 938 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 AL008629.1-201ENST00000438615 184 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 AC069285.2-201ENST00000440210 275 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-1P43699 AL162388.1-201ENST00000450912 352 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-1P43699 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.8□□□□□ -1.8
NKX2-1P43699 AL389915.2-201ENST00000454576 441 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.8□□□□□ -1.8
NKX2-1P43699 MTCO3P2-201ENST00000457365 171 ntBASIC3.8□□□□□ -1.8
NKX2-1P43699 AC010307.1-201ENST00000467206 836 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms