Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.4□□□□□ -1.54
CLIP1P30622 ACTG1P13-201ENST00000486987 1043 ntBASIC5.4□□□□□ -1.54
CLIP1P30622 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLIP1P30622 MIR5004-201ENST00000579078 107 ntBASIC5.4□□□□□ -1.54
CLIP1P30622 BNIP3P11-201ENST00000603878 563 ntBASIC5.4□□□□□ -1.54
CLIP1P30622 AC011816.2-201ENST00000607089 556 ntBASIC5.4□□□□□ -1.54
CLIP1P30622 AC244205.2-202ENST00000635781 342 ntBASIC5.4□□□□□ -1.54
CLIP1P30622 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
CLIP1P30622 HSPA8P19-201ENST00000505359 1517 ntBASIC5.4□□□□□ -1.54
CLIP1P30622 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLIP1P30622 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CLIP1P30622 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLIP1P30622 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLIP1P30622 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CLIP1P30622 SNORA48.5-201ENST00000391143 135 ntBASIC5.4□□□□□ -1.55
CLIP1P30622 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.4□□□□□ -1.55
CLIP1P30622 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.4□□□□□ -1.55
CLIP1P30622 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.4□□□□□ -1.55
CLIP1P30622 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.4□□□□□ -1.55
CLIP1P30622 OR4R3P-201ENST00000525084 838 ntBASIC5.4□□□□□ -1.55
CLIP1P30622 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.4□□□□□ -1.55
CLIP1P30622 MIR5680-201ENST00000577577 84 ntBASIC5.4□□□□□ -1.55
CLIP1P30622 MIR4738-201ENST00000579134 87 ntBASIC5.4□□□□□ -1.55
CLIP1P30622 AL606834.2-201ENST00000602954 668 ntBASIC5.4□□□□□ -1.55
CLIP1P30622 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.4□□□□□ -1.55
CLIP1P30622 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.4□□□□□ -1.55
CLIP1P30622 AL513302.2-201ENST00000562313 1842 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
CLIP1P30622 AC005332.5-201ENST00000591222 2919 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 MAPK10-373ENST00000641983 6772 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP1P30622 CEP170P1-201ENST00000502249 4587 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP1P30622 RNU1-70P-201ENST00000362618 164 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 RNA5SP374-201ENST00000362939 125 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 AL122016.1-201ENST00000403365 367 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 AL357075.1-201ENST00000404107 726 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 RN7SKP56-201ENST00000410513 331 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 RNA5SP229-201ENST00000410809 99 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.39□□□□□ -1.55
CLIP1P30622 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP1P30622 ATP5C1P1-201ENST00000441945 895 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 AL357552.1-201ENST00000445254 415 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 MTCO3P16-201ENST00000454456 754 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 MTCO3P20-201ENST00000454926 688 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP1P30622 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
CLIP1P30622 UBE2NP1-201ENST00000545592 458 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.39□□□□□ -1.55
CLIP1P30622 CYP2C60P-201ENST00000566088 139 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.39□□□□□ -1.55
CLIP1P30622 BNIP3P38-201ENST00000601117 544 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 AC006557.5-201ENST00000603126 811 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 AL137843.1-201ENST00000605078 385 ntBASIC5.39□□□□□ -1.55
CLIP1P30622 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP1P30622 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLIP1P30622 USP33-201ENST00000357428 4155 ntTSL 5 BASIC5.39□□□□□ -1.55
CLIP1P30622 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP1P30622 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
CLIP1P30622 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLIP1P30622 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP1P30622 AC118273.1-201ENST00000525324 3006 ntBASIC5.38□□□□□ -1.55
CLIP1P30622 TAF9BP1-201ENST00000396646 746 ntBASIC5.38□□□□□ -1.55
CLIP1P30622 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
CLIP1P30622 AC063979.1-201ENST00000415539 377 ntBASIC5.38□□□□□ -1.55
CLIP1P30622 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP1P30622 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.38□□□□□ -1.55
CLIP1P30622 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP1P30622 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.38□□□□□ -1.55
CLIP1P30622 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
CLIP1P30622 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.38□□□□□ -1.55
CLIP1P30622 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP1P30622 AC106785.3-201ENST00000564064 847 ntBASIC5.38□□□□□ -1.55
CLIP1P30622 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP1P30622 CKS1BP3-201ENST00000600888 237 ntBASIC5.38□□□□□ -1.55
CLIP1P30622 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5.38□□□□□ -1.55
CLIP1P30622 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP1P30622 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP1P30622 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP1P30622 AL136116.1-201ENST00000403591 381 ntBASIC5.37□□□□□ -1.55
CLIP1P30622 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP1P30622 AL136126.1-201ENST00000473603 402 ntBASIC5.37□□□□□ -1.55
CLIP1P30622 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP1P30622 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP1P30622 AC009464.1-201ENST00000615731 469 ntBASIC5.37□□□□□ -1.55
CLIP1P30622 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP1P30622 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP1P30622 MTCO1P46-201ENST00000451639 1491 ntBASIC5.37□□□□□ -1.55
CLIP1P30622 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.36□□□□□ -1.55
CLIP1P30622 AL353743.1-202ENST00000431724 1695 ntBASIC5.36□□□□□ -1.55
CLIP1P30622 GNG5P1-201ENST00000255500 204 ntBASIC5.36□□□□□ -1.55
CLIP1P30622 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.36□□□□□ -1.55
CLIP1P30622 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.36□□□□□ -1.55
CLIP1P30622 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.36□□□□□ -1.55
CLIP1P30622 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.36□□□□□ -1.55
CLIP1P30622 AC125494.3-201ENST00000602759 455 ntBASIC5.36□□□□□ -1.55
CLIP1P30622 CR392039.4-201ENST00000624968 501 ntBASIC5.36□□□□□ -1.55
CLIP1P30622 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.36□□□□□ -1.55
CLIP1P30622 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLIP1P30622 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms