Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.12□□□□□ -1.75
PTPN4P29074 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.12□□□□□ -1.75
PTPN4P29074 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.12□□□□□ -1.75
PTPN4P29074 AC093227.2-201ENST00000589357 285 ntBASIC4.12□□□□□ -1.75
PTPN4P29074 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.12□□□□□ -1.75
PTPN4P29074 LLPHP1-201ENST00000603571 367 ntBASIC4.12□□□□□ -1.75
PTPN4P29074 AC069304.3-201ENST00000603938 1084 ntBASIC4.12□□□□□ -1.75
PTPN4P29074 AL591034.3-201ENST00000605511 685 ntBASIC4.12□□□□□ -1.75
PTPN4P29074 AP003117.2-201ENST00000606010 545 ntBASIC4.12□□□□□ -1.75
PTPN4P29074 AC105429.2-201ENST00000610567 517 ntBASIC4.12□□□□□ -1.75
PTPN4P29074 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.12□□□□□ -1.75
PTPN4P29074 AL445493.3-201ENST00000619568 477 ntBASIC4.12□□□□□ -1.75
PTPN4P29074 MIR8059-201ENST00000620427 81 ntBASIC4.12□□□□□ -1.75
PTPN4P29074 AC004943.3-201ENST00000624116 600 ntBASIC4.12□□□□□ -1.75
PTPN4P29074 AC090506.2-201ENST00000624521 419 ntBASIC4.12□□□□□ -1.75
PTPN4P29074 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.12□□□□□ -1.75
PTPN4P29074 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTPN4P29074 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTPN4P29074 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN4P29074 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN4P29074 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN4P29074 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN4P29074 MTCO1P14-201ENST00000441695 1559 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN4P29074 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN4P29074 MIR423-201ENST00000362201 94 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 RNU1-64P-201ENST00000365443 163 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 AL603766.1-201ENST00000407763 664 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 ETF1P3-201ENST00000430422 1160 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPN4P29074 OR4C10P-201ENST00000434991 931 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 HSFY6P-201ENST00000445573 403 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPN4P29074 AC239367.2-201ENST00000447309 705 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPN4P29074 SNORD108-201ENST00000459332 71 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 AC018635.1-201ENST00000468292 1030 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.11□□□□□ -1.75
PTPN4P29074 AC008958.1-201ENST00000511047 682 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 AC005351.1-201ENST00000511152 786 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPN4P29074 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN4P29074 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPN4P29074 AC063950.1-201ENST00000552036 308 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPN4P29074 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPN4P29074 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPN4P29074 AC074050.1-201ENST00000563247 211 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 AC027104.1-201ENST00000563702 681 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 AC090751.1-201ENST00000566966 267 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 MIR1254-2-201ENST00000579553 63 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 MRPS35P3-201ENST00000603189 709 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 OR2BH1P-201ENST00000608850 864 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPN4P29074 AC007546.1-201ENST00000619452 559 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 RNA5SP196-201ENST00000625967 102 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPN4P29074 NCAPGP1-201ENST00000505112 1814 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 LARP1BP1-201ENST00000506036 1359 ntBASIC4.11□□□□□ -1.75
PTPN4P29074 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN4P29074 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPN4P29074 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN4P29074 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN4P29074 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN4P29074 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN4P29074 OR11H4-201ENST00000315409 1082 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN4P29074 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN4P29074 RNU1-13P-201ENST00000384499 162 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 AC097374.1-203ENST00000400783 485 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 RNU2-65P-201ENST00000410162 185 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 RN7SKP177-201ENST00000410567 355 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 PRELID3BP11-201ENST00000414230 479 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN4P29074 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN4P29074 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN4P29074 EIF1P3-201ENST00000423841 334 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 OR5AW1P-201ENST00000426334 1006 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 IFNNP1-201ENST00000429219 553 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 FTH1P6-201ENST00000430768 320 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 AL365396.1-201ENST00000430854 671 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 AC005189.1-201ENST00000431286 310 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN4P29074 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN4P29074 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN4P29074 PPIAP3-201ENST00000450588 505 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN4P29074 RN7SL93P-201ENST00000463035 293 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN4P29074 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN4P29074 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN4P29074 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 HPRT1P2-201ENST00000505250 544 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN4P29074 AC018797.3-201ENST00000513388 1241 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 RNU6-467P-201ENST00000517027 110 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 AC008562.1-201ENST00000521763 330 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN4P29074 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms