Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 FAM92A1P2-202ENST00000504766 877 ntBASIC4.93□□□□□ -1.62
CD40P25942 HMGB1P29-201ENST00000505659 499 ntBASIC4.93□□□□□ -1.62
CD40P25942 AC010493.1-201ENST00000513479 292 ntBASIC4.93□□□□□ -1.62
CD40P25942 ATP5LP3-201ENST00000514223 304 ntBASIC4.93□□□□□ -1.62
CD40P25942 AC093853.1-201ENST00000515689 483 ntBASIC4.93□□□□□ -1.62
CD40P25942 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.93□□□□□ -1.62
CD40P25942 NRBF2P4-201ENST00000520874 850 ntBASIC4.93□□□□□ -1.62
CD40P25942 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.93□□□□□ -1.62
CD40P25942 FAM92A1P1-201ENST00000528023 890 ntBASIC4.93□□□□□ -1.62
CD40P25942 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CD40P25942 AC123904.2-201ENST00000548059 300 ntBASIC4.93□□□□□ -1.62
CD40P25942 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.93□□□□□ -1.62
CD40P25942 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.93□□□□□ -1.62
CD40P25942 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.93□□□□□ -1.62
CD40P25942 AC007225.2-201ENST00000562529 256 ntBASIC4.93□□□□□ -1.62
CD40P25942 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.93□□□□□ -1.62
CD40P25942 BGLT3-201ENST00000564523 994 ntBASIC4.93□□□□□ -1.62
CD40P25942 MIR1273E-201ENST00000581165 102 ntBASIC4.93□□□□□ -1.62
CD40P25942 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC4.93□□□□□ -1.62
CD40P25942 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.93□□□□□ -1.62
CD40P25942 YWHAQP7-201ENST00000603536 658 ntBASIC4.93□□□□□ -1.62
CD40P25942 AC245014.2-201ENST00000603689 287 ntBASIC4.93□□□□□ -1.62
CD40P25942 AC246785.4-201ENST00000605374 287 ntBASIC4.93□□□□□ -1.62
CD40P25942 AL590282.1-201ENST00000610379 1136 ntBASIC4.93□□□□□ -1.62
CD40P25942 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.93□□□□□ -1.62
CD40P25942 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD40P25942 AC022467.1-201ENST00000614738 749 ntBASIC4.93□□□□□ -1.62
CD40P25942 AC009159.1-201ENST00000618386 642 ntBASIC4.93□□□□□ -1.62
CD40P25942 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CD40P25942 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CD40P25942 LRRC77P-213ENST00000637727 880 ntBASIC4.93□□□□□ -1.62
CD40P25942 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CD40P25942 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD40P25942 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD40P25942 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD40P25942 AC239868.2-201ENST00000564237 4527 ntBASIC4.93□□□□□ -1.62
CD40P25942 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD40P25942 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD40P25942 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CD40P25942 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.93□□□□□ -1.62
CD40P25942 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
CD40P25942 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CD40P25942 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CD40P25942 ZNF658B-201ENST00000602828 3408 ntBASIC4.93□□□□□ -1.62
CD40P25942 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.92□□□□□ -1.62
CD40P25942 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.92□□□□□ -1.62
CD40P25942 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CD40P25942 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CD40P25942 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 RARSP1-201ENST00000542842 1418 ntBASIC4.92□□□□□ -1.62
CD40P25942 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CD40P25942 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CD40P25942 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 AC011155.1-201ENST00000316512 456 ntBASIC4.92□□□□□ -1.62
CD40P25942 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CD40P25942 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 RNA5SP132-201ENST00000364725 118 ntBASIC4.92□□□□□ -1.62
CD40P25942 RN7SKP124-201ENST00000364730 341 ntBASIC4.92□□□□□ -1.62
CD40P25942 RNU5E-4P-201ENST00000364931 120 ntBASIC4.92□□□□□ -1.62
CD40P25942 RNA5SP30-201ENST00000365552 115 ntBASIC4.92□□□□□ -1.62
CD40P25942 MIR130A-201ENST00000385274 89 ntBASIC4.92□□□□□ -1.62
CD40P25942 RNU6-780P-201ENST00000391030 104 ntBASIC4.92□□□□□ -1.62
CD40P25942 ENSAP1-201ENST00000392855 326 ntBASIC4.92□□□□□ -1.62
CD40P25942 MRPL42P2-201ENST00000403169 426 ntBASIC4.92□□□□□ -1.62
CD40P25942 AL049697.2-201ENST00000403708 294 ntBASIC4.92□□□□□ -1.62
CD40P25942 MIR1277-201ENST00000408536 78 ntBASIC4.92□□□□□ -1.62
CD40P25942 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 RPL30P3-201ENST00000424262 333 ntBASIC4.92□□□□□ -1.62
CD40P25942 CRIP1P1-201ENST00000427567 185 ntBASIC4.92□□□□□ -1.62
CD40P25942 DPPA2P1-201ENST00000428060 556 ntBASIC4.92□□□□□ -1.62
CD40P25942 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.92□□□□□ -1.62
CD40P25942 OR2B7P-201ENST00000429302 934 ntBASIC4.92□□□□□ -1.62
CD40P25942 AC000111.3-201ENST00000433478 193 ntBASIC4.92□□□□□ -1.62
CD40P25942 CBX1P1-201ENST00000440184 427 ntBASIC4.92□□□□□ -1.62
CD40P25942 H3F3BP1-201ENST00000440551 403 ntBASIC4.92□□□□□ -1.62
CD40P25942 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.92□□□□□ -1.62
CD40P25942 TCEA1P1-201ENST00000449716 880 ntBASIC4.92□□□□□ -1.62
CD40P25942 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.92□□□□□ -1.62
CD40P25942 C1DP4-201ENST00000455429 424 ntBASIC4.92□□□□□ -1.62
CD40P25942 RPL38P1-201ENST00000460914 211 ntBASIC4.92□□□□□ -1.62
CD40P25942 AP001992.1-205ENST00000462248 379 ntBASIC4.92□□□□□ -1.62
CD40P25942 AC087385.1-201ENST00000475062 312 ntBASIC4.92□□□□□ -1.62
CD40P25942 SAP18P1-201ENST00000512058 390 ntBASIC4.92□□□□□ -1.62
CD40P25942 RN7SKP67-201ENST00000515905 235 ntBASIC4.92□□□□□ -1.62
CD40P25942 snoU109.5-201ENST00000516231 132 ntBASIC4.92□□□□□ -1.62
CD40P25942 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD40P25942 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.92□□□□□ -1.62
CD40P25942 AP001893.2-201ENST00000526949 202 ntBASIC4.92□□□□□ -1.62
CD40P25942 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC4.92□□□□□ -1.62
CD40P25942 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms