Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC6.4□□□□□ -1.38
LMNB1P20700 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.4□□□□□ -1.38
LMNB1P20700 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.4□□□□□ -1.38
LMNB1P20700 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.4□□□□□ -1.38
LMNB1P20700 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.4□□□□□ -1.38
LMNB1P20700 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.4□□□□□ -1.38
LMNB1P20700 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.4□□□□□ -1.38
LMNB1P20700 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.4□□□□□ -1.38
LMNB1P20700 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.4□□□□□ -1.38
LMNB1P20700 AL590392.1-201ENST00000604960 446 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 AL391358.1-201ENST00000605342 190 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 AL354760.1-201ENST00000608357 643 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.4□□□□□ -1.38
LMNB1P20700 FAM157B-203ENST00000639350 358 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
LMNB1P20700 AC004656.1-201ENST00000568479 4951 ntBASIC6.4□□□□□ -1.39
LMNB1P20700 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
LMNB1P20700 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
LMNB1P20700 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LMNB1P20700 AL359955.1-201ENST00000455242 3275 ntBASIC6.4□□□□□ -1.39
LMNB1P20700 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.4□□□□□ -1.39
LMNB1P20700 AC091046.3-201ENST00000631455 1574 ntBASIC6.4□□□□□ -1.39
LMNB1P20700 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.39□□□□□ -1.39
LMNB1P20700 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LMNB1P20700 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
LMNB1P20700 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LMNB1P20700 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
LMNB1P20700 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LMNB1P20700 AC006484.1-201ENST00000435086 1884 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LMNB1P20700 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
LMNB1P20700 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
LMNB1P20700 Y_RNA.97-201ENST00000363094 102 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 RN7SKP227-201ENST00000364445 330 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LMNB1P20700 AC104297.1-201ENST00000393779 870 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 RPS3AP23-201ENST00000401762 784 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.39□□□□□ -1.39
LMNB1P20700 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.39□□□□□ -1.39
LMNB1P20700 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.39□□□□□ -1.39
LMNB1P20700 RIMKLBP2-201ENST00000424737 654 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.39□□□□□ -1.39
LMNB1P20700 AL662791.1-201ENST00000441992 928 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 RAB11AP1-201ENST00000442978 646 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.39□□□□□ -1.39
LMNB1P20700 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.39□□□□□ -1.39
LMNB1P20700 RPL31P58-201ENST00000469001 379 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 COX6B1P5-201ENST00000509843 249 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 AC022483.1-201ENST00000514020 567 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.39□□□□□ -1.39
LMNB1P20700 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.39□□□□□ -1.39
LMNB1P20700 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.39□□□□□ -1.39
LMNB1P20700 AC009962.1-201ENST00000567327 3813 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.39□□□□□ -1.39
LMNB1P20700 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.39□□□□□ -1.39
LMNB1P20700 AC025253.1-201ENST00000613623 543 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 AC234782.5-201ENST00000617723 324 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.39□□□□□ -1.39
LMNB1P20700 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LMNB1P20700 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LMNB1P20700 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LMNB1P20700 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LMNB1P20700 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.39□□□□□ -1.39
LMNB1P20700 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.39□□□□□ -1.39
LMNB1P20700 AC119744.1-201ENST00000454746 1715 ntBASIC6.39□□□□□ -1.39
LMNB1P20700 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LMNB1P20700 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
LMNB1P20700 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
LMNB1P20700 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LMNB1P20700 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
LMNB1P20700 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
LMNB1P20700 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LMNB1P20700 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LMNB1P20700 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LMNB1P20700 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.38□□□□□ -1.39
LMNB1P20700 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
LMNB1P20700 RNU4-12P-201ENST00000365233 139 ntBASIC6.38□□□□□ -1.39
LMNB1P20700 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.38□□□□□ -1.39
LMNB1P20700 RNU5A-6P-201ENST00000384136 116 ntBASIC6.38□□□□□ -1.39
LMNB1P20700 RNU1-136P-201ENST00000384181 164 ntBASIC6.38□□□□□ -1.39
LMNB1P20700 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
LMNB1P20700 SNORA40.3-201ENST00000390964 122 ntBASIC6.38□□□□□ -1.39
LMNB1P20700 RNA5SP113-201ENST00000410486 84 ntBASIC6.38□□□□□ -1.39
LMNB1P20700 AC109780.2-201ENST00000413467 845 ntBASIC6.38□□□□□ -1.39
LMNB1P20700 HMGB3P23-201ENST00000414981 585 ntBASIC6.38□□□□□ -1.39
LMNB1P20700 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.38□□□□□ -1.39
LMNB1P20700 AC004690.1-201ENST00000418216 328 ntBASIC6.38□□□□□ -1.39
LMNB1P20700 AL109913.1-201ENST00000421173 514 ntBASIC6.38□□□□□ -1.39
LMNB1P20700 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
LMNB1P20700 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LMNB1P20700 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.38□□□□□ -1.39
LMNB1P20700 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.38□□□□□ -1.39
LMNB1P20700 BMS1P19-201ENST00000433925 393 ntBASIC6.38□□□□□ -1.39
LMNB1P20700 AL831737.1-201ENST00000441288 271 ntBASIC6.38□□□□□ -1.39
LMNB1P20700 SNRPEP8-201ENST00000442866 260 ntBASIC6.38□□□□□ -1.39
LMNB1P20700 RPL36AP15-201ENST00000444514 266 ntBASIC6.38□□□□□ -1.39
LMNB1P20700 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.38□□□□□ -1.39
LMNB1P20700 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.38□□□□□ -1.39
LMNB1P20700 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.38□□□□□ -1.39
LMNB1P20700 AC146507.1-201ENST00000468335 354 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms