Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFRAP16234 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFRAP16234 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.38□□□□□ -1.71
PDGFRAP16234 AL121657.1-201ENST00000327215 531 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 U6.112-201ENST00000384129 70 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 FABP12P1-201ENST00000401911 322 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 RN7SKP182-201ENST00000410772 298 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 UBE2V1P9-201ENST00000414760 368 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 AC246680.2-201ENST00000422106 389 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 EIF4EP1-201ENST00000422311 642 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.38□□□□□ -1.71
PDGFRAP16234 AC000041.1-201ENST00000439655 175 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 AC005002.1-201ENST00000447458 540 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 AL050341.1-201ENST00000447743 313 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 HMGN1P5-201ENST00000448591 263 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.38□□□□□ -1.71
PDGFRAP16234 CDC42P1-201ENST00000456658 548 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 RN7SL585P-201ENST00000470538 280 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 AC103987.1-201ENST00000473394 348 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 AC015724.1-201ENST00000478577 156 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 AF213884.1-201ENST00000488102 463 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.38□□□□□ -1.71
PDGFRAP16234 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.38□□□□□ -1.71
PDGFRAP16234 IFITM8P-201ENST00000522529 394 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 AC105233.3-201ENST00000531125 744 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.38□□□□□ -1.71
PDGFRAP16234 AC007424.1-203ENST00000554613 687 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFRAP16234 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFRAP16234 MIR3908-201ENST00000579798 126 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFRAP16234 AC133794.1-201ENST00000602731 914 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFRAP16234 MIR6864-201ENST00000617935 70 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 AL109620.1-201ENST00000618738 1197 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 AC011266.1-201ENST00000624119 3569 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.38□□□□□ -1.71
PDGFRAP16234 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDGFRAP16234 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PDGFRAP16234 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.38□□□□□ -1.71
PDGFRAP16234 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.38□□□□□ -1.71
PDGFRAP16234 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFRAP16234 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFRAP16234 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.37□□□□□ -1.71
PDGFRAP16234 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFRAP16234 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
PDGFRAP16234 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PDGFRAP16234 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFRAP16234 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFRAP16234 XIAPP3-201ENST00000312918 795 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 RNA5SP388-201ENST00000362584 119 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 PRRC2CP1-201ENST00000404428 159 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 PRELID3BP11-201ENST00000414230 479 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFRAP16234 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.37□□□□□ -1.71
PDGFRAP16234 COX6B1P7-201ENST00000430845 235 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 RPL21P110-201ENST00000433345 446 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 RPS7P2-201ENST00000435134 607 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 HMGB1P45-201ENST00000435986 653 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 RPL21P133-201ENST00000443666 476 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFRAP16234 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.37□□□□□ -1.71
PDGFRAP16234 RAD23BP3-201ENST00000454157 1152 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 SNRPGP5-201ENST00000456003 220 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFRAP16234 AC068587.1-201ENST00000483613 781 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.37□□□□□ -1.71
PDGFRAP16234 AC017037.1-201ENST00000508460 471 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 AC110792.2-201ENST00000510278 224 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFRAP16234 RPL7L1P13-201ENST00000511702 739 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 AC099522.1-202ENST00000514718 367 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 RN7SKP96-201ENST00000516948 297 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.37□□□□□ -1.71
PDGFRAP16234 MYL12AP1-201ENST00000518490 515 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFRAP16234 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFRAP16234 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFRAP16234 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.37□□□□□ -1.71
PDGFRAP16234 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.37□□□□□ -1.71
PDGFRAP16234 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.37□□□□□ -1.71
PDGFRAP16234 AC104072.1-201ENST00000568817 668 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.37□□□□□ -1.71
PDGFRAP16234 TMF1P1-201ENST00000576058 373 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.37□□□□□ -1.71
PDGFRAP16234 AC006116.7-201ENST00000590141 756 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 AC023043.4-201ENST00000612081 449 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 AC106858.1-201ENST00000637497 429 ntBASIC4.37□□□□□ -1.71
PDGFRAP16234 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PDGFRAP16234 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.37□□□□□ -1.71
PDGFRAP16234 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDGFRAP16234 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.36□□□□□ -1.71
PDGFRAP16234 XPOTP1-201ENST00000443317 2398 ntBASIC4.36□□□□□ -1.71
PDGFRAP16234 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDGFRAP16234 SNORA70C-201ENST00000384538 135 ntBASIC4.36□□□□□ -1.71
PDGFRAP16234 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PDGFRAP16234 AC069282.1-201ENST00000411911 526 ntBASIC4.36□□□□□ -1.71
PDGFRAP16234 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.36□□□□□ -1.71
PDGFRAP16234 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms