Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TOP1P11387 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.45□□□□□ -1.7
TOP1P11387 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TOP1P11387 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.44□□□□□ -1.7
TOP1P11387 AC024560.2-201ENST00000507981 1497 ntBASIC4.44□□□□□ -1.7
TOP1P11387 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TOP1P11387 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
TOP1P11387 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.44□□□□□ -1.7
TOP1P11387 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TOP1P11387 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
TOP1P11387 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TOP1P11387 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
TOP1P11387 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TOP1P11387 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TOP1P11387 RNA5SP124-201ENST00000362739 110 ntBASIC4.44□□□□□ -1.7
TOP1P11387 U3.15-201ENST00000365398 212 ntBASIC4.44□□□□□ -1.7
TOP1P11387 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TOP1P11387 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TOP1P11387 FTH1P6-201ENST00000430768 320 ntBASIC4.44□□□□□ -1.7
TOP1P11387 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.44□□□□□ -1.7
TOP1P11387 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.44□□□□□ -1.7
TOP1P11387 Z99127.2-201ENST00000441426 334 ntBASIC4.44□□□□□ -1.7
TOP1P11387 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TOP1P11387 AL133547.1-201ENST00000448546 220 ntBASIC4.44□□□□□ -1.7
TOP1P11387 UBDP1-202ENST00000457888 382 ntBASIC4.44□□□□□ -1.7
TOP1P11387 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.44□□□□□ -1.7
TOP1P11387 ACTR3P3-201ENST00000480448 893 ntBASIC4.44□□□□□ -1.7
TOP1P11387 AC021087.2-201ENST00000504656 1203 ntBASIC4.44□□□□□ -1.7
TOP1P11387 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.44□□□□□ -1.7
TOP1P11387 SNORA67.7-201ENST00000516664 135 ntBASIC4.44□□□□□ -1.7
TOP1P11387 HMGB1P23-201ENST00000518743 568 ntBASIC4.44□□□□□ -1.7
TOP1P11387 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.44□□□□□ -1.7
TOP1P11387 OR4U1P-201ENST00000554958 912 ntBASIC4.44□□□□□ -1.7
TOP1P11387 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.44□□□□□ -1.7
TOP1P11387 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.44□□□□□ -1.7
TOP1P11387 MIR5187-201ENST00000583479 76 ntBASIC4.44□□□□□ -1.7
TOP1P11387 MIR3158-1-201ENST00000583596 81 ntBASIC4.44□□□□□ -1.7
TOP1P11387 SNORA62.6-201ENST00000606322 83 ntBASIC4.44□□□□□ -1.7
TOP1P11387 AL354760.1-201ENST00000608357 643 ntBASIC4.44□□□□□ -1.7
TOP1P11387 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.44□□□□□ -1.7
TOP1P11387 AC107905.1-201ENST00000616204 426 ntBASIC4.44□□□□□ -1.7
TOP1P11387 CR392039.5-201ENST00000623201 510 ntBASIC4.44□□□□□ -1.7
TOP1P11387 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.44□□□□□ -1.7
TOP1P11387 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.44□□□□□ -1.7
TOP1P11387 AL353743.4-201ENST00000422653 1547 ntBASIC4.44□□□□□ -1.7
TOP1P11387 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TOP1P11387 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
TOP1P11387 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TOP1P11387 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TOP1P11387 DCAF13P3-201ENST00000561147 1334 ntBASIC4.44□□□□□ -1.7
TOP1P11387 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TOP1P11387 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
TOP1P11387 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.43□□□□□ -1.7
TOP1P11387 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TOP1P11387 SNORA62.3-201ENST00000365110 153 ntBASIC4.43□□□□□ -1.7
TOP1P11387 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.43□□□□□ -1.7
TOP1P11387 RNU6-317P-201ENST00000384031 107 ntBASIC4.43□□□□□ -1.7
TOP1P11387 RNU6-31P-201ENST00000384388 108 ntBASIC4.43□□□□□ -1.7
TOP1P11387 RAB9AP3-201ENST00000412737 573 ntBASIC4.43□□□□□ -1.7
TOP1P11387 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TOP1P11387 AC114814.2-201ENST00000419195 485 ntBASIC4.43□□□□□ -1.7
TOP1P11387 TCEA1P2-201ENST00000420496 906 ntBASIC4.43□□□□□ -1.7
TOP1P11387 IFNNP1-201ENST00000429219 553 ntBASIC4.43□□□□□ -1.7
TOP1P11387 RPL7P4-203ENST00000430239 730 ntBASIC4.43□□□□□ -1.7
TOP1P11387 Z85994.2-201ENST00000434327 452 ntBASIC4.43□□□□□ -1.7
TOP1P11387 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.43□□□□□ -1.7
TOP1P11387 SNORA71B-202ENST00000439232 272 ntBASIC4.43□□□□□ -1.7
TOP1P11387 RAB9AP1-201ENST00000449393 573 ntBASIC4.43□□□□□ -1.7
TOP1P11387 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.43□□□□□ -1.7
TOP1P11387 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.43□□□□□ -1.7
TOP1P11387 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.43□□□□□ -1.7
TOP1P11387 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TOP1P11387 AC084198.1-201ENST00000477747 402 ntBASIC4.43□□□□□ -1.7
TOP1P11387 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.43□□□□□ -1.7
TOP1P11387 OR5H4P-201ENST00000510851 923 ntBASIC4.43□□□□□ -1.7
TOP1P11387 RAC1P2-201ENST00000511164 579 ntBASIC4.43□□□□□ -1.7
TOP1P11387 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TOP1P11387 AC005798.1-201ENST00000513715 387 ntBASIC4.43□□□□□ -1.7
TOP1P11387 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.43□□□□□ -1.7
TOP1P11387 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.43□□□□□ -1.7
TOP1P11387 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.43□□□□□ -1.7
TOP1P11387 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.43□□□□□ -1.7
TOP1P11387 AC007991.1-201ENST00000522680 631 ntBASIC4.43□□□□□ -1.7
TOP1P11387 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.43□□□□□ -1.7
TOP1P11387 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.43□□□□□ -1.7
TOP1P11387 AL049634.3-201ENST00000604968 457 ntBASIC4.43□□□□□ -1.7
TOP1P11387 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.43□□□□□ -1.7
TOP1P11387 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TOP1P11387 AC006133.1-201ENST00000617106 264 ntBASIC4.43□□□□□ -1.7
TOP1P11387 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.43□□□□□ -1.7
TOP1P11387 AC079684.1-201ENST00000621405 437 ntBASIC4.43□□□□□ -1.7
TOP1P11387 AC015726.3-201ENST00000624501 418 ntBASIC4.43□□□□□ -1.7
TOP1P11387 AC012442.3-202ENST00000636742 206 ntBASIC4.43□□□□□ -1.7
TOP1P11387 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.43□□□□□ -1.7
TOP1P11387 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
TOP1P11387 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TOP1P11387 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TOP1P11387 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.42□□□□□ -1.7
TOP1P11387 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.42□□□□□ -1.7
TOP1P11387 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms