Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.14□□□□□ -1.91
FREM3P0C091 CKS1BP3-201ENST00000600888 237 ntBASIC3.14□□□□□ -1.91
FREM3P0C091 AC092354.2-201ENST00000607786 514 ntBASIC3.14□□□□□ -1.91
FREM3P0C091 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.14□□□□□ -1.91
FREM3P0C091 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.14□□□□□ -1.91
FREM3P0C091 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.14□□□□□ -1.91
FREM3P0C091 AL732372.2-225ENST00000642124 456 ntBASIC3.14□□□□□ -1.91
FREM3P0C091 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.14□□□□□ -1.91
FREM3P0C091 AL645937.1-201ENST00000641739 1652 ntBASIC3.14□□□□□ -1.91
FREM3P0C091 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FREM3P0C091 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FREM3P0C091 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FREM3P0C091 RNA5SP235-201ENST00000365411 114 ntBASIC3.14□□□□□ -1.91
FREM3P0C091 AL034403.1-201ENST00000399414 885 ntBASIC3.14□□□□□ -1.91
FREM3P0C091 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.14□□□□□ -1.91
FREM3P0C091 RPS26P40-201ENST00000435209 294 ntBASIC3.14□□□□□ -1.91
FREM3P0C091 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.14□□□□□ -1.91
FREM3P0C091 ANP32BP2-201ENST00000454525 545 ntBASIC3.14□□□□□ -1.91
FREM3P0C091 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.14□□□□□ -1.91
FREM3P0C091 OR9N1P-201ENST00000491296 333 ntBASIC3.14□□□□□ -1.91
FREM3P0C091 RPL23AP73-201ENST00000492507 471 ntBASIC3.14□□□□□ -1.91
FREM3P0C091 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.14□□□□□ -1.91
FREM3P0C091 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.14□□□□□ -1.91
FREM3P0C091 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FREM3P0C091 AC106785.3-201ENST00000564064 847 ntBASIC3.14□□□□□ -1.91
FREM3P0C091 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.14□□□□□ -1.91
FREM3P0C091 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
FREM3P0C091 HSPA8P19-201ENST00000505359 1517 ntBASIC3.14□□□□□ -1.91
FREM3P0C091 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.14□□□□□ -1.91
FREM3P0C091 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.13□□□□□ -1.91
FREM3P0C091 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.13□□□□□ -1.91
FREM3P0C091 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.13□□□□□ -1.91
FREM3P0C091 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FREM3P0C091 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
FREM3P0C091 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FREM3P0C091 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
FREM3P0C091 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.13□□□□□ -1.91
FREM3P0C091 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.13□□□□□ -1.91
FREM3P0C091 PDSS1P2-201ENST00000449397 678 ntBASIC3.13□□□□□ -1.91
FREM3P0C091 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.13□□□□□ -1.91
FREM3P0C091 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.13□□□□□ -1.91
FREM3P0C091 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.13□□□□□ -1.91
FREM3P0C091 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.13□□□□□ -1.91
FREM3P0C091 CYP2C60P-201ENST00000566088 139 ntBASIC3.13□□□□□ -1.91
FREM3P0C091 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.13□□□□□ -1.91
FREM3P0C091 AL031985.2-201ENST00000600955 480 ntBASIC3.13□□□□□ -1.91
FREM3P0C091 AC025946.2-201ENST00000603398 234 ntBASIC3.13□□□□□ -1.91
FREM3P0C091 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.13□□□□□ -1.91
FREM3P0C091 AC012020.1-201ENST00000624541 1728 ntBASIC3.13□□□□□ -1.91
FREM3P0C091 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
FREM3P0C091 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FREM3P0C091 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FREM3P0C091 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.13□□□□□ -1.91
FREM3P0C091 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.13□□□□□ -1.91
FREM3P0C091 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FREM3P0C091 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.13□□□□□ -1.91
FREM3P0C091 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
FREM3P0C091 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.13□□□□□ -1.91
FREM3P0C091 MIR423-201ENST00000362201 94 ntBASIC3.13□□□□□ -1.91
FREM3P0C091 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
FREM3P0C091 AL138878.1-201ENST00000405131 347 ntBASIC3.13□□□□□ -1.91
FREM3P0C091 SNORA11C-201ENST00000408532 129 ntBASIC3.13□□□□□ -1.91
FREM3P0C091 RHEBP3-201ENST00000411920 351 ntBASIC3.13□□□□□ -1.91
FREM3P0C091 RPS26P47-201ENST00000427219 348 ntBASIC3.13□□□□□ -1.91
FREM3P0C091 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.13□□□□□ -1.91
FREM3P0C091 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.13□□□□□ -1.91
FREM3P0C091 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.13□□□□□ -1.91
FREM3P0C091 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.13□□□□□ -1.91
FREM3P0C091 AC012493.2-201ENST00000595083 291 ntBASIC3.13□□□□□ -1.91
FREM3P0C091 AL008729.2-201ENST00000606393 473 ntBASIC3.13□□□□□ -1.91
FREM3P0C091 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.13□□□□□ -1.91
FREM3P0C091 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FREM3P0C091 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FREM3P0C091 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
FREM3P0C091 AC107027.3-201ENST00000565095 3473 ntBASIC3.12□□□□□ -1.91
FREM3P0C091 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FREM3P0C091 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FREM3P0C091 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
FREM3P0C091 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FREM3P0C091 RNA5SP72-201ENST00000364442 117 ntBASIC3.12□□□□□ -1.91
FREM3P0C091 RSL24D1P1-201ENST00000404972 493 ntBASIC3.12□□□□□ -1.91
FREM3P0C091 HMGN1P24-201ENST00000412282 298 ntBASIC3.12□□□□□ -1.91
FREM3P0C091 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FREM3P0C091 AC006989.1-201ENST00000427212 131 ntBASIC3.12□□□□□ -1.91
FREM3P0C091 AL589765.3-201ENST00000446084 462 ntBASIC3.12□□□□□ -1.91
FREM3P0C091 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.12□□□□□ -1.91
FREM3P0C091 AC104849.1-201ENST00000462623 405 ntBASIC3.12□□□□□ -1.91
FREM3P0C091 RFPL4AP3-201ENST00000515267 345 ntBASIC3.12□□□□□ -1.91
FREM3P0C091 RPS27AP18-201ENST00000515536 459 ntBASIC3.12□□□□□ -1.91
FREM3P0C091 IGKV2-26-201ENST00000518305 343 ntBASIC3.12□□□□□ -1.91
FREM3P0C091 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.12□□□□□ -1.91
FREM3P0C091 AC026333.2-201ENST00000542164 106 ntBASIC3.12□□□□□ -1.91
FREM3P0C091 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.12□□□□□ -1.91
FREM3P0C091 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.12□□□□□ -1.91
FREM3P0C091 AP001005.3-201ENST00000622049 129 ntBASIC3.12□□□□□ -1.91
FREM3P0C091 AP003355.3-201ENST00000623465 114 ntBASIC3.12□□□□□ -1.91
FREM3P0C091 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.12□□□□□ -1.91
FREM3P0C091 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.12□□□□□ -1.91
FREM3P0C091 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FREM3P0C091 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms