Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
APOEP02649 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.87□□□□□ -1.79
APOEP02649 AC018644.1-201ENST00000429934 551 ntBASIC3.87□□□□□ -1.79
APOEP02649 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.87□□□□□ -1.79
APOEP02649 SKP1P1-201ENST00000438081 489 ntBASIC3.87□□□□□ -1.79
APOEP02649 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.87□□□□□ -1.79
APOEP02649 U8.18-201ENST00000459285 133 ntBASIC3.87□□□□□ -1.79
APOEP02649 RN7SL330P-201ENST00000469709 307 ntBASIC3.87□□□□□ -1.79
APOEP02649 AP001086.1-201ENST00000494882 321 ntBASIC3.87□□□□□ -1.79
APOEP02649 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.87□□□□□ -1.79
APOEP02649 SAP18P1-201ENST00000512058 390 ntBASIC3.87□□□□□ -1.79
APOEP02649 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
APOEP02649 AC108471.1-201ENST00000513977 287 ntBASIC3.87□□□□□ -1.79
APOEP02649 RN7SKP83-201ENST00000516512 178 ntBASIC3.87□□□□□ -1.79
APOEP02649 NPM1P52-201ENST00000518264 846 ntBASIC3.87□□□□□ -1.79
APOEP02649 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.87□□□□□ -1.79
APOEP02649 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.87□□□□□ -1.79
APOEP02649 AL121766.1-201ENST00000547436 487 ntBASIC3.87□□□□□ -1.79
APOEP02649 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.87□□□□□ -1.79
APOEP02649 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.87□□□□□ -1.79
APOEP02649 AC099489.2-201ENST00000574976 260 ntBASIC3.87□□□□□ -1.79
APOEP02649 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.87□□□□□ -1.79
APOEP02649 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.87□□□□□ -1.79
APOEP02649 AC022146.1-201ENST00000595307 847 ntBASIC3.87□□□□□ -1.79
APOEP02649 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.87□□□□□ -1.79
APOEP02649 AC079684.1-201ENST00000621405 437 ntBASIC3.87□□□□□ -1.79
APOEP02649 AL161912.2-201ENST00000565707 3007 ntBASIC3.87□□□□□ -1.79
APOEP02649 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.87□□□□□ -1.79
APOEP02649 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
APOEP02649 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
APOEP02649 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
APOEP02649 CASC19-284ENST00000642142 1868 ntBASIC3.86□□□□□ -1.79
APOEP02649 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.86□□□□□ -1.79
APOEP02649 USP9YP31-201ENST00000431405 881 ntBASIC3.86□□□□□ -1.79
APOEP02649 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.86□□□□□ -1.79
APOEP02649 CACYBPP1-201ENST00000438592 684 ntBASIC3.86□□□□□ -1.79
APOEP02649 AC092013.1-201ENST00000438795 332 ntBASIC3.86□□□□□ -1.79
APOEP02649 AL133547.1-201ENST00000448546 220 ntBASIC3.86□□□□□ -1.79
APOEP02649 MTCO3P16-201ENST00000454456 754 ntBASIC3.86□□□□□ -1.79
APOEP02649 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.86□□□□□ -1.79
APOEP02649 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.86□□□□□ -1.79
APOEP02649 RPL23AP62-201ENST00000463396 453 ntBASIC3.86□□□□□ -1.79
APOEP02649 RPL9P32-201ENST00000464118 620 ntBASIC3.86□□□□□ -1.79
APOEP02649 OR7E13P-201ENST00000526052 910 ntBASIC3.86□□□□□ -1.79
APOEP02649 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.86□□□□□ -1.79
APOEP02649 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.86□□□□□ -1.79
APOEP02649 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.86□□□□□ -1.79
APOEP02649 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.86□□□□□ -1.79
APOEP02649 AC034236.3-201ENST00000605999 461 ntBASIC3.86□□□□□ -1.79
APOEP02649 SNORA35B-201ENST00000607417 129 ntBASIC3.86□□□□□ -1.79
APOEP02649 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.86□□□□□ -1.79
APOEP02649 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.86□□□□□ -1.79
APOEP02649 CR392039.5-201ENST00000623201 510 ntBASIC3.86□□□□□ -1.79
APOEP02649 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.86□□□□□ -1.79
APOEP02649 AP000553.6-201ENST00000641242 118 ntBASIC3.86□□□□□ -1.79
APOEP02649 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
APOEP02649 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.86□□□□□ -1.79
APOEP02649 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
APOEP02649 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
APOEP02649 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
APOEP02649 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
APOEP02649 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
APOEP02649 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
APOEP02649 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
APOEP02649 AC007066.1-201ENST00000392902 381 ntBASIC3.85□□□□□ -1.79
APOEP02649 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.85□□□□□ -1.79
APOEP02649 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.85□□□□□ -1.79
APOEP02649 AC073464.3-201ENST00000422564 712 ntBASIC3.85□□□□□ -1.79
APOEP02649 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
APOEP02649 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.85□□□□□ -1.79
APOEP02649 HMGB3P21-201ENST00000452483 547 ntBASIC3.85□□□□□ -1.79
APOEP02649 UBDP1-202ENST00000457888 382 ntBASIC3.85□□□□□ -1.79
APOEP02649 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.85□□□□□ -1.79
APOEP02649 AC021146.1-201ENST00000511202 716 ntBASIC3.85□□□□□ -1.79
APOEP02649 PAICSP4-201ENST00000517543 1253 ntBASIC3.85□□□□□ -1.79
APOEP02649 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.85□□□□□ -1.79
APOEP02649 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.85□□□□□ -1.79
APOEP02649 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.85□□□□□ -1.79
APOEP02649 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.85□□□□□ -1.79
APOEP02649 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.85□□□□□ -1.79
APOEP02649 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.85□□□□□ -1.79
APOEP02649 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.85□□□□□ -1.79
APOEP02649 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
APOEP02649 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
APOEP02649 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.85□□□□□ -1.79
APOEP02649 AL121772.2-201ENST00000614331 297 ntBASIC3.85□□□□□ -1.79
APOEP02649 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
APOEP02649 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
APOEP02649 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
APOEP02649 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
APOEP02649 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
APOEP02649 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.85□□□□□ -1.79
APOEP02649 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
APOEP02649 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
APOEP02649 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
APOEP02649 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
APOEP02649 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
APOEP02649 PTMAP5-201ENST00000393073 333 ntBASIC3.84□□□□□ -1.79
APOEP02649 RPL21P17-201ENST00000397467 475 ntBASIC3.84□□□□□ -1.79
APOEP02649 AL034374.1-201ENST00000406329 351 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms