Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNOT4O95628 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CNOT4O95628 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNOT4O95628 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNOT4O95628 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CNOT4O95628 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.15□□□□□ -1.58
CNOT4O95628 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNOT4O95628 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNOT4O95628 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CNOT4O95628 RNU6-1090P-201ENST00000364065 94 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 Y_RNA.295-201ENST00000364918 102 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CNOT4O95628 GSTA9P-201ENST00000406231 611 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.15□□□□□ -1.59
CNOT4O95628 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.15□□□□□ -1.59
CNOT4O95628 C1DP2-201ENST00000418167 426 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 RPL21P111-201ENST00000418453 477 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.15□□□□□ -1.59
CNOT4O95628 RPL34P3-201ENST00000421454 338 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CNOT4O95628 AC005033.1-201ENST00000428904 813 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.15□□□□□ -1.59
CNOT4O95628 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.15□□□□□ -1.59
CNOT4O95628 BMS1P19-201ENST00000433925 393 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 MTCYBP45-201ENST00000435243 565 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 AL163193.1-201ENST00000444895 788 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNOT4O95628 RPL23AP15-201ENST00000450202 459 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
CNOT4O95628 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.15□□□□□ -1.59
CNOT4O95628 TRBV5-2-201ENST00000489095 273 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 RNF138P1-201ENST00000502765 546 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 AC097173.1-201ENST00000505862 819 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 ARL4AP2-201ENST00000507378 601 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 HMGB1P28-201ENST00000507778 552 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 AC009646.1-201ENST00000510455 318 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 AF131216.2-201ENST00000512316 564 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 MTCO1P35-201ENST00000515270 228 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 SNORA18.6-201ENST00000516792 115 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 CYCSP22-201ENST00000517555 339 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.15□□□□□ -1.59
CNOT4O95628 AC123904.3-201ENST00000547218 814 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.15□□□□□ -1.59
CNOT4O95628 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.15□□□□□ -1.59
CNOT4O95628 AC126615.2-201ENST00000553003 515 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 HMGB1P33-201ENST00000563485 527 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 AL133457.1-201ENST00000564251 987 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.15□□□□□ -1.59
CNOT4O95628 AL391840.1-201ENST00000571144 367 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.15□□□□□ -1.59
CNOT4O95628 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.15□□□□□ -1.59
CNOT4O95628 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNOT4O95628 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNOT4O95628 AL589674.2-201ENST00000604304 337 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNOT4O95628 MIR6719-201ENST00000622428 87 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
CNOT4O95628 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.15□□□□□ -1.59
CNOT4O95628 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CNOT4O95628 Z95327.2-201ENST00000414579 1873 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.15□□□□□ -1.59
CNOT4O95628 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNOT4O95628 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.15□□□□□ -1.59
CNOT4O95628 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CNOT4O95628 MAPK10-338ENST00000641647 3362 ntBASIC5.15□□□□□ -1.59
CNOT4O95628 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNOT4O95628 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CNOT4O95628 AL022578.1-201ENST00000439330 1433 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CNOT4O95628 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNOT4O95628 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.14□□□□□ -1.59
CNOT4O95628 AL592437.2-201ENST00000421655 2434 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CNOT4O95628 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNOT4O95628 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CNOT4O95628 Y_RNA.97-201ENST00000363094 102 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 Y_RNA.160-201ENST00000363677 92 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 RNU6-534P-201ENST00000364877 106 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 Y_RNA.509-201ENST00000384506 99 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 MIR105-2-201ENST00000385083 81 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 RNU6-780P-201ENST00000391030 104 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 RPS24P12-201ENST00000402084 394 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 RN7SKP29-201ENST00000410957 272 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.14□□□□□ -1.59
CNOT4O95628 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.14□□□□□ -1.59
CNOT4O95628 RPL30P3-201ENST00000424262 333 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.14□□□□□ -1.59
CNOT4O95628 AC023347.2-201ENST00000433994 462 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CNOT4O95628 AL451074.3-201ENST00000437709 472 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.14□□□□□ -1.59
CNOT4O95628 RPL18AP17-201ENST00000455326 198 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.14□□□□□ -1.59
CNOT4O95628 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.14□□□□□ -1.59
CNOT4O95628 AC022215.1-201ENST00000481770 362 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 RPL38P3-201ENST00000484463 213 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 MTCYBP17-201ENST00000503579 789 ntBASIC5.14□□□□□ -1.59
CNOT4O95628 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.14□□□□□ -1.59
CNOT4O95628 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms