Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.38□□□□□ -1.55
PRPF3O43395 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.38□□□□□ -1.55
PRPF3O43395 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF3O43395 KARSP3-201ENST00000571212 1504 ntBASIC5.38□□□□□ -1.55
PRPF3O43395 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF3O43395 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.37□□□□□ -1.55
PRPF3O43395 AL139811.1-201ENST00000424779 2299 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PRPF3O43395 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF3O43395 EIF2AP4-201ENST00000424793 1781 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF3O43395 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
PRPF3O43395 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF3O43395 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF3O43395 AC011155.1-201ENST00000316512 456 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF3O43395 RN7SKP103-201ENST00000363848 320 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 RNU6-441P-201ENST00000384545 106 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 MIR649-201ENST00000384843 97 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 MIR298-201ENST00000401212 88 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF3O43395 MTND4P22-201ENST00000413116 1169 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AL136133.1-201ENST00000413694 376 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.37□□□□□ -1.55
PRPF3O43395 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF3O43395 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF3O43395 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.37□□□□□ -1.55
PRPF3O43395 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF3O43395 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF3O43395 MTCO3P2-201ENST00000457365 171 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 SCARNA10-201ENST00000459255 330 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AC010326.1-201ENST00000462726 602 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 RPS20P21-201ENST00000466859 343 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AC108751.2-201ENST00000469993 231 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AC087879.1-201ENST00000474343 374 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 SETP14-201ENST00000497538 873 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AC104090.1-201ENST00000506341 1171 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AC110792.2-201ENST00000510278 224 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AC007016.1-201ENST00000512110 244 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 DUXAP6-201ENST00000553858 601 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF3O43395 TRAV15-201ENST00000556680 249 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.37□□□□□ -1.55
PRPF3O43395 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF3O43395 AP005119.2-201ENST00000579735 1105 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 MIR4270-201ENST00000581799 70 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 RN7SL690P-201ENST00000582087 240 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF3O43395 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.37□□□□□ -1.55
PRPF3O43395 AL031281.1-201ENST00000604049 488 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AC115621.1-201ENST00000604653 858 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AL158042.1-201ENST00000605338 460 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AC091946.2-201ENST00000606105 291 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AC078883.4-201ENST00000623218 367 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AC017037.3-201ENST00000625016 472 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF3O43395 U3.53-201ENST00000628922 216 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.37□□□□□ -1.55
PRPF3O43395 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PRPF3O43395 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PRPF3O43395 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF3O43395 AL122126.1-201ENST00000546905 1318 ntBASIC5.37□□□□□ -1.55
PRPF3O43395 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF3O43395 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF3O43395 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF3O43395 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
PRPF3O43395 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
PRPF3O43395 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF3O43395 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PRPF3O43395 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF3O43395 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
PRPF3O43395 AC021242.1-201ENST00000507315 2035 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF3O43395 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF3O43395 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF3O43395 RNU6-931P-201ENST00000363850 107 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 RNU1-85P-201ENST00000364127 164 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 RNVU1-6-201ENST00000364688 164 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PRPF3O43395 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.36□□□□□ -1.55
PRPF3O43395 AL139128.1-201ENST00000413921 941 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF3O43395 SDCBPP2-201ENST00000424643 885 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 SETP8-201ENST00000435341 628 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 RPL23AP16-201ENST00000441715 421 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 RSL24D1P3-201ENST00000449255 495 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 IFNWP4-201ENST00000453148 294 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 ISCUP1-201ENST00000454451 448 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 AL109741.2-201ENST00000455561 343 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF3O43395 AC013828.1-201ENST00000481845 158 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF3O43395 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
PRPF3O43395 RPS3AP22-201ENST00000488297 769 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
PRPF3O43395 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF3O43395 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.36□□□□□ -1.55
PRPF3O43395 AC018797.3-201ENST00000513388 1241 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 HNRNPKP5-201ENST00000515300 253 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 AC104057.1-201ENST00000515547 497 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms