Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.82□□□□□ -1.8
LSM1O15116 AC105402.2-201ENST00000438503 358 ntBASIC3.82□□□□□ -1.8
LSM1O15116 HMGB1P37-201ENST00000439613 609 ntBASIC3.82□□□□□ -1.8
LSM1O15116 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.82□□□□□ -1.8
LSM1O15116 RPL12P26-201ENST00000452430 487 ntBASIC3.82□□□□□ -1.8
LSM1O15116 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.82□□□□□ -1.8
LSM1O15116 RN7SL93P-201ENST00000463035 293 ntBASIC3.82□□□□□ -1.8
LSM1O15116 AC004801.2-202ENST00000463559 283 ntBASIC3.82□□□□□ -1.8
LSM1O15116 SNRPGP3-201ENST00000469405 227 ntBASIC3.82□□□□□ -1.8
LSM1O15116 AC092451.1-201ENST00000480211 153 ntBASIC3.82□□□□□ -1.8
LSM1O15116 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.82□□□□□ -1.8
LSM1O15116 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.82□□□□□ -1.8
LSM1O15116 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.82□□□□□ -1.8
LSM1O15116 AC012414.2-201ENST00000559474 187 ntBASIC3.82□□□□□ -1.8
LSM1O15116 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.82□□□□□ -1.8
LSM1O15116 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.82□□□□□ -1.8
LSM1O15116 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.82□□□□□ -1.8
LSM1O15116 AC068790.4-201ENST00000602474 263 ntBASIC3.82□□□□□ -1.8
LSM1O15116 AL392112.1-201ENST00000605115 829 ntBASIC3.82□□□□□ -1.8
LSM1O15116 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.82□□□□□ -1.8
LSM1O15116 AC110792.4-201ENST00000609843 298 ntBASIC3.82□□□□□ -1.8
LSM1O15116 AC016911.1-201ENST00000613297 452 ntBASIC3.82□□□□□ -1.8
LSM1O15116 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.82□□□□□ -1.8
LSM1O15116 U6.48-201ENST00000618523 106 ntBASIC3.82□□□□□ -1.8
LSM1O15116 AC024023.1-201ENST00000624530 922 ntBASIC3.82□□□□□ -1.8
LSM1O15116 MIR7153-201ENST00000637758 57 ntBASIC3.82□□□□□ -1.8
LSM1O15116 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.82□□□□□ -1.8
LSM1O15116 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
LSM1O15116 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
LSM1O15116 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.82□□□□□ -1.8
LSM1O15116 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.81□□□□□ -1.8
LSM1O15116 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LSM1O15116 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LSM1O15116 AC092326.2-201ENST00000624772 1561 ntBASIC3.81□□□□□ -1.8
LSM1O15116 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LSM1O15116 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LSM1O15116 RNA5SP399-201ENST00000364003 117 ntBASIC3.81□□□□□ -1.8
LSM1O15116 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.81□□□□□ -1.8
LSM1O15116 OR5BE1P-201ENST00000425977 939 ntBASIC3.81□□□□□ -1.8
LSM1O15116 AC068287.1-201ENST00000430283 295 ntBASIC3.81□□□□□ -1.8
LSM1O15116 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.81□□□□□ -1.8
LSM1O15116 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.81□□□□□ -1.8
LSM1O15116 AL138799.3-201ENST00000438968 350 ntBASIC3.81□□□□□ -1.8
LSM1O15116 EIF2S2P2-201ENST00000447161 982 ntBASIC3.81□□□□□ -1.8
LSM1O15116 AL500522.2-201ENST00000448562 343 ntBASIC3.81□□□□□ -1.8
LSM1O15116 SBDSP1-204ENST00000453858 737 ntBASIC3.81□□□□□ -1.8
LSM1O15116 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.81□□□□□ -1.8
LSM1O15116 MTCO3P20-201ENST00000454926 688 ntBASIC3.81□□□□□ -1.8
LSM1O15116 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.81□□□□□ -1.8
LSM1O15116 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.81□□□□□ -1.8
LSM1O15116 BTF3L4P4-201ENST00000506381 449 ntBASIC3.81□□□□□ -1.8
LSM1O15116 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LSM1O15116 AC093840.1-201ENST00000511599 336 ntBASIC3.81□□□□□ -1.8
LSM1O15116 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LSM1O15116 RNU2-58P-201ENST00000516403 183 ntBASIC3.81□□□□□ -1.8
LSM1O15116 HAUS1P3-201ENST00000523909 662 ntBASIC3.81□□□□□ -1.8
LSM1O15116 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.81□□□□□ -1.8
LSM1O15116 MIR4277-201ENST00000578298 84 ntBASIC3.81□□□□□ -1.8
LSM1O15116 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.81□□□□□ -1.8
LSM1O15116 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.81□□□□□ -1.8
LSM1O15116 AC011492.1-201ENST00000600023 315 ntBASIC3.81□□□□□ -1.8
LSM1O15116 LLPHP1-201ENST00000603571 367 ntBASIC3.81□□□□□ -1.8
LSM1O15116 MIR6868-201ENST00000611215 58 ntBASIC3.81□□□□□ -1.8
LSM1O15116 CR589904.2-201ENST00000612533 440 ntBASIC3.81□□□□□ -1.8
LSM1O15116 AL592295.2-201ENST00000612578 206 ntBASIC3.81□□□□□ -1.8
LSM1O15116 AC020763.5-201ENST00000623298 430 ntBASIC3.81□□□□□ -1.8
LSM1O15116 AC010608.2-201ENST00000624830 470 ntBASIC3.81□□□□□ -1.8
LSM1O15116 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.81□□□□□ -1.8
LSM1O15116 OR5BE1P-202ENST00000641168 1176 ntBASIC3.81□□□□□ -1.8
LSM1O15116 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.81□□□□□ -1.8
LSM1O15116 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.81□□□□□ -1.8
LSM1O15116 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LSM1O15116 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LSM1O15116 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
LSM1O15116 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LSM1O15116 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.8□□□□□ -1.8
LSM1O15116 AC138915.3-201ENST00000562908 1389 ntBASIC3.8□□□□□ -1.8
LSM1O15116 RNU6-40P-201ENST00000384254 107 ntBASIC3.8□□□□□ -1.8
LSM1O15116 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.8□□□□□ -1.8
LSM1O15116 RPL7AP73-201ENST00000413490 353 ntBASIC3.8□□□□□ -1.8
LSM1O15116 TCEA1P4-201ENST00000415066 844 ntBASIC3.8□□□□□ -1.8
LSM1O15116 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.8□□□□□ -1.8
LSM1O15116 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.8□□□□□ -1.8
LSM1O15116 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.8□□□□□ -1.8
LSM1O15116 RPL23AP38-201ENST00000423801 469 ntBASIC3.8□□□□□ -1.8
LSM1O15116 COX6CP15-201ENST00000426313 211 ntBASIC3.8□□□□□ -1.8
LSM1O15116 DNAJC19P7-201ENST00000428811 344 ntBASIC3.8□□□□□ -1.8
LSM1O15116 IFNNP1-201ENST00000429219 553 ntBASIC3.8□□□□□ -1.8
LSM1O15116 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.8□□□□□ -1.8
LSM1O15116 HIGD1AP4-201ENST00000430194 280 ntBASIC3.8□□□□□ -1.8
LSM1O15116 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LSM1O15116 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.8□□□□□ -1.8
LSM1O15116 RPS17P13-201ENST00000448974 407 ntBASIC3.8□□□□□ -1.8
LSM1O15116 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.8□□□□□ -1.8
LSM1O15116 RPS11P1-201ENST00000451072 473 ntBASIC3.8□□□□□ -1.8
LSM1O15116 AC096992.1-201ENST00000459808 709 ntBASIC3.8□□□□□ -1.8
LSM1O15116 AC010307.1-201ENST00000467206 836 ntBASIC3.8□□□□□ -1.8
LSM1O15116 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
LSM1O15116 RPL21P103-201ENST00000479921 488 ntBASIC3.8□□□□□ -1.8
LSM1O15116 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms