Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RPL23AP92-201ENST00000603609 255 ntBASIC6.13□□□□□ -1.43
CUX2O14529 AP000255.1-201ENST00000610276 676 ntBASIC6.13□□□□□ -1.43
CUX2O14529 AC063952.1-203ENST00000634410 658 ntBASIC6.13□□□□□ -1.43
CUX2O14529 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CUX2O14529 AC007656.2-201ENST00000624902 4547 ntBASIC6.12□□□□□ -1.43
CUX2O14529 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CUX2O14529 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CUX2O14529 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CUX2O14529 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CUX2O14529 NPM1P11-201ENST00000417106 855 ntBASIC6.12□□□□□ -1.43
CUX2O14529 BTF3P9-201ENST00000418784 283 ntBASIC6.12□□□□□ -1.43
CUX2O14529 AC097262.1-201ENST00000452559 548 ntBASIC6.12□□□□□ -1.43
CUX2O14529 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.12□□□□□ -1.43
CUX2O14529 AC111000.5-201ENST00000506559 1178 ntBASIC6.12□□□□□ -1.43
CUX2O14529 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.12□□□□□ -1.43
CUX2O14529 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.12□□□□□ -1.43
CUX2O14529 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.12□□□□□ -1.43
CUX2O14529 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.12□□□□□ -1.43
CUX2O14529 AC244517.3-201ENST00000616254 1235 ntBASIC6.12□□□□□ -1.43
CUX2O14529 AC138932.5-201ENST00000617759 563 ntBASIC6.12□□□□□ -1.43
CUX2O14529 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.12□□□□□ -1.43
CUX2O14529 AC138393.1-206ENST00000540997 1886 ntBASIC6.12□□□□□ -1.43
CUX2O14529 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.12□□□□□ -1.43
CUX2O14529 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CUX2O14529 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CUX2O14529 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC6.11□□□□□ -1.43
CUX2O14529 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.11□□□□□ -1.43
CUX2O14529 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CUX2O14529 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
CUX2O14529 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.11□□□□□ -1.43
CUX2O14529 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CUX2O14529 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CUX2O14529 OR5H2-201ENST00000355273 945 ntBASIC6.11□□□□□ -1.43
CUX2O14529 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CUX2O14529 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.11□□□□□ -1.43
CUX2O14529 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.11□□□□□ -1.43
CUX2O14529 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.11□□□□□ -1.43
CUX2O14529 RN7SL432P-201ENST00000484057 298 ntBASIC6.11□□□□□ -1.43
CUX2O14529 AC017037.1-201ENST00000508460 471 ntBASIC6.11□□□□□ -1.43
CUX2O14529 AC022080.3-201ENST00000544433 482 ntBASIC6.11□□□□□ -1.43
CUX2O14529 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.11□□□□□ -1.43
CUX2O14529 AL390816.3-201ENST00000604527 1066 ntBASIC6.11□□□□□ -1.43
CUX2O14529 AL137790.1-201ENST00000634283 177 ntBASIC6.11□□□□□ -1.43
CUX2O14529 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC6.11□□□□□ -1.43
CUX2O14529 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CUX2O14529 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
CUX2O14529 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CUX2O14529 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CUX2O14529 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CUX2O14529 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CUX2O14529 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CUX2O14529 MIR93-201ENST00000385024 80 ntBASIC6.1□□□□□ -1.43
CUX2O14529 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.1□□□□□ -1.43
CUX2O14529 AL603825.1-201ENST00000438481 80 ntBASIC6.1□□□□□ -1.43
CUX2O14529 ELOCP8-201ENST00000439309 332 ntBASIC6.1□□□□□ -1.43
CUX2O14529 ELOCP15-201ENST00000442090 332 ntBASIC6.1□□□□□ -1.43
CUX2O14529 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC6.1□□□□□ -1.43
CUX2O14529 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CUX2O14529 AC108941.1-201ENST00000502853 530 ntBASIC6.1□□□□□ -1.43
CUX2O14529 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.1□□□□□ -1.43
CUX2O14529 AC026801.2-201ENST00000515352 425 ntBASIC6.1□□□□□ -1.43
CUX2O14529 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.1□□□□□ -1.43
CUX2O14529 AC011270.1-201ENST00000558606 583 ntBASIC6.1□□□□□ -1.43
CUX2O14529 LSM1P2-201ENST00000604911 322 ntBASIC6.1□□□□□ -1.43
CUX2O14529 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC6.1□□□□□ -1.43
CUX2O14529 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CUX2O14529 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CUX2O14529 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CUX2O14529 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CUX2O14529 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CUX2O14529 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CUX2O14529 RNA5SP424-201ENST00000390988 115 ntBASIC6.09□□□□□ -1.43
CUX2O14529 RNU4-47P-201ENST00000410876 114 ntBASIC6.09□□□□□ -1.43
CUX2O14529 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.09□□□□□ -1.43
CUX2O14529 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC6.09□□□□□ -1.43
CUX2O14529 AC140076.1-201ENST00000449897 361 ntBASIC6.09□□□□□ -1.43
CUX2O14529 AL136097.1-201ENST00000456945 913 ntBASIC6.09□□□□□ -1.43
CUX2O14529 AC109925.1-201ENST00000478069 331 ntBASIC6.09□□□□□ -1.43
CUX2O14529 RNA5SP154-201ENST00000516193 111 ntBASIC6.09□□□□□ -1.43
CUX2O14529 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.09□□□□□ -1.43
CUX2O14529 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC6.09□□□□□ -1.43
CUX2O14529 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.09□□□□□ -1.43
CUX2O14529 AC079298.2-201ENST00000623885 459 ntBASIC6.09□□□□□ -1.43
CUX2O14529 IGHVIII-44-202ENST00000636235 289 ntBASIC6.09□□□□□ -1.43
CUX2O14529 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC6.09□□□□□ -1.43
CUX2O14529 AL136360.1-201ENST00000503377 1900 ntBASIC6.09□□□□□ -1.43
CUX2O14529 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CUX2O14529 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CUX2O14529 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CUX2O14529 RNU6ATAC3P-201ENST00000387974 126 ntBASIC6.09□□□□□ -1.44
CUX2O14529 TXNP1-201ENST00000441872 371 ntBASIC6.09□□□□□ -1.44
CUX2O14529 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.09□□□□□ -1.44
CUX2O14529 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.09□□□□□ -1.44
CUX2O14529 AL583832.1-201ENST00000603227 784 ntBASIC6.09□□□□□ -1.44
CUX2O14529 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.09□□□□□ -1.44
CUX2O14529 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.09□□□□□ -1.44
CUX2O14529 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.09□□□□□ -1.44
CUX2O14529 OR4G1P-202ENST00000641173 1788 ntBASIC6.08□□□□□ -1.44
CUX2O14529 AC005261.6-201ENST00000623072 1387 ntBASIC6.08□□□□□ -1.44
CUX2O14529 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 433.3 ms