Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.4□□□□□ -1.71
O00370 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
O00370 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
O00370 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
O00370 AC116667.1-201ENST00000604855 2072 ntBASIC4.39□□□□□ -1.71
O00370 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
O00370 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
O00370 MFSD8-220ENST00000641243 1422 ntBASIC4.39□□□□□ -1.71
O00370 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
O00370 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.39□□□□□ -1.71
O00370 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
O00370 SNORD56.4-201ENST00000363883 71 ntBASIC4.39□□□□□ -1.71
O00370 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
O00370 MIR708-201ENST00000390708 88 ntBASIC4.39□□□□□ -1.71
O00370 RNU6-1000P-201ENST00000391066 106 ntBASIC4.39□□□□□ -1.71
O00370 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
O00370 AL603766.1-201ENST00000407763 664 ntBASIC4.39□□□□□ -1.71
O00370 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.39□□□□□ -1.71
O00370 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.39□□□□□ -1.71
O00370 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.39□□□□□ -1.71
O00370 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.39□□□□□ -1.71
O00370 AC006011.1-201ENST00000442758 349 ntBASIC4.39□□□□□ -1.71
O00370 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.39□□□□□ -1.71
O00370 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.39□□□□□ -1.71
O00370 TPT1P12-201ENST00000448968 492 ntBASIC4.39□□□□□ -1.71
O00370 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.39□□□□□ -1.71
O00370 FTH1P2-201ENST00000466086 412 ntBASIC4.39□□□□□ -1.71
O00370 RN7SL385P-201ENST00000468873 276 ntBASIC4.39□□□□□ -1.71
O00370 RPL21P18-201ENST00000469899 480 ntBASIC4.39□□□□□ -1.71
O00370 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.39□□□□□ -1.71
O00370 FTH1P24-201ENST00000503502 462 ntBASIC4.39□□□□□ -1.71
O00370 PRELID3BP5-201ENST00000508612 460 ntBASIC4.39□□□□□ -1.71
O00370 OR5H4P-201ENST00000510851 923 ntBASIC4.39□□□□□ -1.71
O00370 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.39□□□□□ -1.71
O00370 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.39□□□□□ -1.71
O00370 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.39□□□□□ -1.71
O00370 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.39□□□□□ -1.71
O00370 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.39□□□□□ -1.71
O00370 POLR2KP1-201ENST00000553226 168 ntBASIC4.39□□□□□ -1.71
O00370 AC090666.1-201ENST00000578241 445 ntBASIC4.39□□□□□ -1.71
O00370 AP000919.1-202ENST00000581139 1264 ntBASIC4.39□□□□□ -1.71
O00370 AC090330.1-201ENST00000588646 764 ntBASIC4.39□□□□□ -1.71
O00370 AL590392.1-201ENST00000604960 446 ntBASIC4.39□□□□□ -1.71
O00370 AF129408.1-201ENST00000608767 431 ntBASIC4.39□□□□□ -1.71
O00370 AC008759.3-201ENST00000613300 508 ntBASIC4.39□□□□□ -1.71
O00370 AC006338.2-201ENST00000616864 791 ntBASIC4.39□□□□□ -1.71
O00370 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.39□□□□□ -1.71
O00370 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.39□□□□□ -1.71
O00370 AC083865.1-201ENST00000636634 831 ntBASIC4.39□□□□□ -1.71
O00370 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.39□□□□□ -1.71
O00370 ERCC6-202ENST00000374127 1782 ntBASIC4.39□□□□□ -1.71
O00370 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
O00370 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
O00370 AC022893.2-201ENST00000564832 3296 ntBASIC4.39□□□□□ -1.71
O00370 AC007529.1-201ENST00000418574 2178 ntBASIC4.38□□□□□ -1.71
O00370 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
O00370 AC027287.1-201ENST00000553115 1453 ntBASIC4.38□□□□□ -1.71
O00370 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
O00370 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
O00370 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
O00370 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
O00370 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
O00370 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
O00370 RNU6-468P-201ENST00000384003 109 ntBASIC4.38□□□□□ -1.71
O00370 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
O00370 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.38□□□□□ -1.71
O00370 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.38□□□□□ -1.71
O00370 FTH1P6-201ENST00000430768 320 ntBASIC4.38□□□□□ -1.71
O00370 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.38□□□□□ -1.71
O00370 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.38□□□□□ -1.71
O00370 AL096803.2-201ENST00000450032 677 ntBASIC4.38□□□□□ -1.71
O00370 RPL36AP13-201ENST00000457490 317 ntBASIC4.38□□□□□ -1.71
O00370 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.38□□□□□ -1.71
O00370 AC006517.1-201ENST00000480485 328 ntBASIC4.38□□□□□ -1.71
O00370 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.38□□□□□ -1.71
O00370 AC119751.4-201ENST00000507498 357 ntBASIC4.38□□□□□ -1.71
O00370 KRT19P6-201ENST00000510983 209 ntBASIC4.38□□□□□ -1.71
O00370 IGLVIV-53-201ENST00000520107 367 ntBASIC4.38□□□□□ -1.71
O00370 OR5AK3P-201ENST00000527486 1297 ntBASIC4.38□□□□□ -1.71
O00370 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.38□□□□□ -1.71
O00370 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.38□□□□□ -1.71
O00370 CYB5AP5-201ENST00000549779 389 ntBASIC4.38□□□□□ -1.71
O00370 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.38□□□□□ -1.71
O00370 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.38□□□□□ -1.71
O00370 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.38□□□□□ -1.71
O00370 AC067852.4-201ENST00000590314 478 ntBASIC4.38□□□□□ -1.71
O00370 AC020914.4-201ENST00000597690 277 ntBASIC4.38□□□□□ -1.71
O00370 AC011458.1-201ENST00000604034 617 ntBASIC4.38□□□□□ -1.71
O00370 AC105148.1-201ENST00000604961 409 ntBASIC4.38□□□□□ -1.71
O00370 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.38□□□□□ -1.71
O00370 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
O00370 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.38□□□□□ -1.71
O00370 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
O00370 AP005264.7-201ENST00000625003 745 ntBASIC4.38□□□□□ -1.71
O00370 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
O00370 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
O00370 AL627171.1-201ENST00000618845 1308 ntBASIC4.38□□□□□ -1.71
O00370 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
O00370 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.38□□□□□ -1.71
O00370 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms