Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AL139286.1-201ENST00000604465 483 ntBASIC3.97□□□□□ -1.77
SLC28A1O00337 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC28A1O00337 AC105429.2-201ENST00000610567 517 ntBASIC3.97□□□□□ -1.77
SLC28A1O00337 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.97□□□□□ -1.77
SLC28A1O00337 AC080188.3-201ENST00000624842 748 ntBASIC3.97□□□□□ -1.77
SLC28A1O00337 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.97□□□□□ -1.77
SLC28A1O00337 AL356118.1-201ENST00000635272 1078 ntBASIC3.97□□□□□ -1.77
SLC28A1O00337 AC025263.3-201ENST00000622965 1396 ntBASIC3.97□□□□□ -1.77
SLC28A1O00337 AL136964.1-201ENST00000622038 2990 ntBASIC3.97□□□□□ -1.77
SLC28A1O00337 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC28A1O00337 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SLC28A1O00337 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SLC28A1O00337 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SLC28A1O00337 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC28A1O00337 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC28A1O00337 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC28A1O00337 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC28A1O00337 AC107081.3-201ENST00000612715 2034 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC28A1O00337 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC28A1O00337 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.96□□□□□ -1.78
SLC28A1O00337 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC28A1O00337 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SLC28A1O00337 RNU6-398P-201ENST00000384143 109 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 RNU6-1151P-201ENST00000384684 107 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SLC28A1O00337 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
SLC28A1O00337 RNU4-25P-201ENST00000410569 230 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 CNOT7P1-201ENST00000429006 852 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 YWHAZP8-201ENST00000436935 731 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC28A1O00337 AC044797.1-201ENST00000445744 679 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC28A1O00337 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC28A1O00337 AC009963.2-201ENST00000453431 138 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 RNA5SP246-201ENST00000458909 119 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 snoU13.1-201ENST00000459157 104 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC28A1O00337 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC28A1O00337 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC28A1O00337 RPL29P14-201ENST00000495837 428 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SLC28A1O00337 AC093824.1-201ENST00000508796 343 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC28A1O00337 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC28A1O00337 MTND2P26-201ENST00000528255 1029 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC28A1O00337 AC068831.4-201ENST00000556118 109 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC28A1O00337 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.96□□□□□ -1.78
SLC28A1O00337 AC017100.2-201ENST00000584628 355 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 AP003392.5-201ENST00000607857 415 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 AP000255.1-201ENST00000610276 676 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC28A1O00337 MIR7703-201ENST00000620784 77 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 FAM157B-203ENST00000639350 358 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SLC28A1O00337 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SLC28A1O00337 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC28A1O00337 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC28A1O00337 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC28A1O00337 MFSD8-216ENST00000641147 4009 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 MAPK10-373ENST00000641983 6772 ntBASIC3.96□□□□□ -1.78
SLC28A1O00337 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
SLC28A1O00337 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC28A1O00337 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC28A1O00337 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC28A1O00337 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC28A1O00337 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SLC28A1O00337 AC012618.3-205ENST00000637896 1496 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 U3.15-201ENST00000365398 212 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC28A1O00337 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC28A1O00337 FAR2P2-201ENST00000413041 594 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AC011933.1-201ENST00000413334 321 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC28A1O00337 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC28A1O00337 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC28A1O00337 RPL31P45-201ENST00000419532 356 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 PAICSP7-201ENST00000419829 962 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC28A1O00337 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC28A1O00337 AC234779.1-201ENST00000425910 285 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AL009174.1-201ENST00000426577 416 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AL513175.1-201ENST00000431492 780 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 MRPL50P1-201ENST00000431951 384 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC28A1O00337 RPS3AP54-201ENST00000435535 734 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC28A1O00337 VN1R25P-201ENST00000443385 738 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AL050341.1-201ENST00000447743 313 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC28A1O00337 VN1R40P-201ENST00000455196 941 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC28A1O00337 AC116533.1-201ENST00000459748 321 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AC087385.1-201ENST00000475062 312 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC28A1O00337 RPL31P61-201ENST00000496160 376 ntBASIC3.95□□□□□ -1.78
SLC28A1O00337 KRT19P6-201ENST00000510983 209 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms