Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MIR1183-201ENST00000408856 89 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 RN7SKP235-201ENST00000410662 305 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AL157831.1-201ENST00000426134 473 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 COX6CP15-201ENST00000426313 211 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 ELOCP6-201ENST00000429066 328 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 COX6B1P7-201ENST00000430845 235 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 RPL37P1-201ENST00000432310 284 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 HMGB1P48-201ENST00000446155 598 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 ELOCP12-201ENST00000458706 328 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 RPL7P22-201ENST00000466005 733 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 SETP6-201ENST00000479329 568 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AC139103.1-201ENST00000534696 1030 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 CR383656.14-201ENST00000551951 406 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AC074029.1-201ENST00000552531 1044 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AC005255.1-201ENST00000593748 216 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 EIF1P6-201ENST00000600054 334 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AL109618.2-201ENST00000605527 211 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AL161637.1-201ENST00000622380 412 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AC106730.3-201ENST00000624568 641 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 RNA5SP196-201ENST00000625967 102 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AC046144.1-201ENST00000478559 1853 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AC104446.1-201ENST00000613728 1321 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 Z82217.1-201ENST00000625157 8149 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC067945.1-201ENST00000342609 618 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 RNU1-108P-201ENST00000362556 161 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 RNA5SP388-201ENST00000362584 119 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 SNORA51.12-201ENST00000384448 134 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 SNORA37-201ENST00000384504 129 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 RN7SKP27-201ENST00000410684 333 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC004987.3-201ENST00000413879 771 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 RBMY1KP-201ENST00000423480 476 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 SKP1P3-201ENST00000429280 487 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 RPEP2-201ENST00000432149 701 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC006994.1-201ENST00000438212 839 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 HSFY6P-201ENST00000445573 403 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 RPL6P5-201ENST00000445678 828 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 RPS20P21-201ENST00000466859 343 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 RNA5SP309-201ENST00000516670 106 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC008694.2-201ENST00000517591 306 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 PHBP17-201ENST00000528576 541 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AP003717.3-201ENST00000544832 1180 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC009101.1-201ENST00000568135 242 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AL161729.3-201ENST00000603533 673 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC110741.2-201ENST00000605278 268 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC120053.1-201ENST00000607706 736 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC096586.1-201ENST00000610267 561 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 C2orf27A-204ENST00000623058 969 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AL445363.3-201ENST00000623080 671 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 AC020978.9-201ENST00000624380 1141 ntBASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPIPA2E9PIF3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms