Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 BMI1P1-201ENST00000445879 941 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 GAPDHP25-201ENST00000447061 1001 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 ARPC3P2-201ENST00000457786 533 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 RPS4XP15-201ENST00000489210 795 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AC110792.2-201ENST00000510278 224 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 RN7SKP66-201ENST00000516681 231 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AC137627.1-201ENST00000545761 289 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 U73023.1-201ENST00000603134 700 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AC112187.2-201ENST00000604345 283 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AL139124.1-201ENST00000609123 421 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AC090582.1-201ENST00000636321 199 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 AC097504.1-201ENST00000515103 2415 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA3Q9Y5H0 ELL2P4-201ENST00000446870 1376 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 CASC19-221ENST00000641309 1382 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 RNU4-21P-201ENST00000362802 126 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 SNORA17.1-201ENST00000362945 126 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 U3.4-201ENST00000363352 213 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 RNU6-1243P-201ENST00000364028 107 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 Y_RNA.553-201ENST00000384670 102 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 U3.28-201ENST00000391249 210 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AL109941.1-201ENST00000401925 229 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 OR8G2P-201ENST00000412796 908 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 ATG4AP1-201ENST00000416893 538 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 GSTM5P1-201ENST00000434751 660 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 PSMD10P3-201ENST00000437000 448 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 RNU6-956P-201ENST00000458868 103 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 RPS15AP17-201ENST00000470598 390 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 BX284632.1-201ENST00000478218 541 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 NMNAT1P5-201ENST00000559657 841 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 RPL10P14-201ENST00000565265 298 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AC005341.1-201ENST00000571086 708 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 MIR3936-201ENST00000584304 110 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AC068276.1-201ENST00000605793 379 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AL031775.1-201ENST00000607014 887 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AC009878.1-201ENST00000621819 340 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AL356266.1-201ENST00000623311 483 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AL356596.1-201ENST00000624230 379 ntBASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHGA3Q9Y5H0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
PCDHGA3Q9Y5H0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHGA3Q9Y5H0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.15□□□□□ -1.58
PCDHGA3Q9Y5H0 ADAM5-202ENST00000399789 1942 ntBASIC5.15□□□□□ -1.58
PCDHGA3Q9Y5H0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHGA3Q9Y5H0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
PCDHGA3Q9Y5H0 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHGA3Q9Y5H0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms