Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 SCOCP1-201ENST00000554676 349 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AC087763.1-201ENST00000603391 286 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AL356585.4-201ENST00000623078 1229 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 AP001784.1-201ENST00000624107 428 ntBASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.26□□□□□ -1.25
ZC3H4Q9UPT8 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AC009120.2-204ENST00000621548 2032 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 ERCC6-202ENST00000374127 1782 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 MIR369-201ENST00000362155 70 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 RNA5SP333-201ENST00000363466 118 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 Y_RNA.145-201ENST00000363527 102 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 RNA5SP334-201ENST00000364825 118 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AC019097.1-201ENST00000424783 735 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AL451136.1-201ENST00000435399 325 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AC022431.1-201ENST00000450941 438 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 SNORD19B-201ENST00000459623 84 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 RPL7P15-201ENST00000461190 712 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 RPS27AP17-201ENST00000463344 455 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 RN7SL808P-201ENST00000496066 299 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AL049779.2-201ENST00000553847 315 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AC136443.5-201ENST00000603741 370 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AC011468.4-201ENST00000603942 409 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AP001521.2-201ENST00000608772 546 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 MIR7973-1-201ENST00000614683 76 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 AC009161.2-201ENST00000624626 138 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 MTND5P1-201ENST00000445440 1375 ntBASIC7.25□□□□□ -1.25
ZC3H4Q9UPT8 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AC093775.1-201ENST00000624154 1868 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AC005294.1-201ENST00000355509 281 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 RNU5E-1-201ENST00000362477 120 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 Y_RNA.46-201ENST00000362695 102 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 Y_RNA.202-201ENST00000364083 110 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 RNU6-1158P-201ENST00000391167 107 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 RPL7P25-201ENST00000404151 721 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AL357752.1-201ENST00000412817 349 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 METTL15P3-201ENST00000415522 1221 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms