Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 RPS29P7-201ENST00000439662 171 ntBASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 RPS29P31-201ENST00000446147 164 ntBASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 AC012213.4-201ENST00000606457 354 ntBASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 AC123768.4-201ENST00000616244 701 ntBASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 MTND4P10-201ENST00000446199 1363 ntBASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.46□□□□□ -1.85
VPS29Q9UBQ0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
VPS29Q9UBQ0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 MIR423-201ENST00000362201 94 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 RNA5SP235-201ENST00000365411 114 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 RPL7P60-201ENST00000397636 735 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 RHEBP3-201ENST00000411920 351 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 SDCBPP2-201ENST00000424643 885 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 OSTCP5-201ENST00000425293 453 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 RPL7P2-201ENST00000427639 268 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 BMS1P19-201ENST00000433925 393 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 AC074367.1-201ENST00000438685 1125 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 AC009263.1-201ENST00000441193 1239 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 AL353093.1-201ENST00000441292 436 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 AC006511.1-201ENST00000470614 315 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 AC093267.1-201ENST00000489176 961 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 AC026402.1-201ENST00000513642 170 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 RNU2-27P-201ENST00000516185 142 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 RNA5SP309-201ENST00000516670 106 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 CYP2C60P-201ENST00000566088 139 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 AC107982.3-201ENST00000584957 985 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 AC067959.1-201ENST00000604334 379 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 C2orf27A-204ENST00000623058 969 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 AL118496.1-201ENST00000440201 1812 ntBASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS29Q9UBQ0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 U3.39-201ENST00000408569 239 ntBASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 RAB28P1-201ENST00000411517 641 ntBASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 AC087385.1-201ENST00000475062 312 ntBASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 AC021146.1-201ENST00000511202 716 ntBASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 NPM1P41-201ENST00000512920 831 ntBASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 AL451086.1-201ENST00000605596 223 ntBASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 AC099669.2-201ENST00000616549 437 ntBASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 AC006042.3-201ENST00000454684 1469 ntBASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
VPS29Q9UBQ0 RPS4XP5-202ENST00000449995 1334 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 ASNSP1-204ENST00000641977 1664 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AC066616.2-201ENST00000559334 1481 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 RNU1-87P-201ENST00000363727 170 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AL136116.1-201ENST00000403591 381 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 RN7SKP263-201ENST00000411194 309 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 RPL30P2-201ENST00000414021 291 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AC127526.1-201ENST00000417526 366 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms