Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 MTND4P16-201ENST00000466108 1367 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 OR9K1P-202ENST00000641111 3217 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC092376.2-201ENST00000622621 4116 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 SNORA40.3-201ENST00000390964 122 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 RNA5SP339-201ENST00000390987 122 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AL133388.1-201ENST00000404509 287 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AL391361.1-201ENST00000405580 489 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC109780.2-201ENST00000413467 845 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 USP9YP13-201ENST00000417797 480 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 RPS26P40-201ENST00000435209 294 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC004865.1-201ENST00000442276 1003 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC244505.5-201ENST00000443639 207 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 RPL7L1P1-201ENST00000448259 785 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 TRGVB-201ENST00000453257 471 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC011225.1-201ENST00000457751 369 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 RPS3AP17-201ENST00000472594 777 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 UBA52P3-201ENST00000491303 382 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 RPL9P6-201ENST00000492764 598 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 EIF3LP3-201ENST00000495197 822 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC006499.2-201ENST00000513470 337 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 RNU6-488P-201ENST00000515918 99 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 HMGB1P40-201ENST00000525121 540 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC006363.1-201ENST00000603806 463 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC131902.3-201ENST00000611767 581 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC027807.2-201ENST00000616099 408 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 MIR6729-201ENST00000618194 65 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 CRYM-AS1-204ENST00000637983 556 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 CASC19-264ENST00000641912 1184 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 ELF2P3-201ENST00000445099 1506 ntBASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.56□□□□□ -1.52
PPARGC1AQ9UBK2 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 SNRPEP3-201ENST00000338402 276 ntBASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 Y_RNA.97-201ENST00000363094 102 ntBASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 RN7SKP226-201ENST00000364912 300 ntBASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 MTCYBP36-201ENST00000404146 440 ntBASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 CIR1P3-201ENST00000405137 479 ntBASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 RPS3AP24-201ENST00000407896 734 ntBASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 Y_RNA.598-201ENST00000410480 95 ntBASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 AC007394.1-201ENST00000421941 531 ntBASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 ZYG11AP1-201ENST00000430329 837 ntBASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 CYCSP6-201ENST00000434498 302 ntBASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 RPS11P7-201ENST00000442125 465 ntBASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 MTATP6P30-201ENST00000443540 664 ntBASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 AL589765.3-201ENST00000446084 462 ntBASIC5.55□□□□□ -1.52
PPARGC1AQ9UBK2 HMGN3P1-201ENST00000453847 193 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms