Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 RNU6-252P-201ENST00000363232 107 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 RHOT1P2-201ENST00000366423 333 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 RAC1P3-201ENST00000416129 580 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC073069.1-201ENST00000428657 441 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC073508.1-201ENST00000428866 656 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC083863.1-201ENST00000438811 231 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 MTND2P8-201ENST00000450555 1025 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC006511.1-201ENST00000470614 315 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 PPIAP15-201ENST00000479662 484 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 GAPDHP36-201ENST00000480688 918 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC025445.1-201ENST00000502728 300 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 PRELID3BP7-201ENST00000503606 469 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 RNU1-45P-201ENST00000517191 141 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 IGLVIV-53-201ENST00000520107 367 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 OR5M7P-201ENST00000526140 972 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 CYCSP30-201ENST00000546447 172 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC025260.1-201ENST00000548858 430 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC107982.3-201ENST00000584957 985 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC011374.2-201ENST00000607135 526 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AC073592.7-201ENST00000623659 507 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AP002001.2-201ENST00000529025 1469 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AL161912.2-201ENST00000565707 3007 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 MIR93-201ENST00000385024 80 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 MIR513A2-201ENST00000385249 127 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 RNU6ATAC-201ENST00000408749 126 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 SNORA3C-201ENST00000408792 125 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 RPL7AP73-201ENST00000413490 353 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AL445584.1-201ENST00000431451 330 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 RPS27P5-201ENST00000444247 244 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 Z95327.1-201ENST00000446082 482 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AC069540.1-201ENST00000446320 988 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 SNORA84-201ENST00000459229 133 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 RPL23AP73-201ENST00000492507 471 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AC098799.1-201ENST00000504752 800 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AC025768.1-201ENST00000510057 267 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 RNU6-352P-201ENST00000516908 107 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AC023632.4-201ENST00000517783 191 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 HMGB1P23-201ENST00000518743 568 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AC015726.1-201ENST00000602353 681 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AL139395.1-201ENST00000603662 160 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AC245389.1-201ENST00000605141 529 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 U6.48-201ENST00000618523 106 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 FP236240.3-201ENST00000623061 327 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AC124312.6-202ENST00000623624 418 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 CR392039.4-201ENST00000624968 501 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 AF001550.2-201ENST00000636643 217 ntBASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms