Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL591419.1-201ENST00000427423 339 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 ATP5JP1-201ENST00000431631 322 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 RPS20P1-201ENST00000434853 354 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC239798.3-201ENST00000454459 408 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 RN7SL809P-201ENST00000482040 297 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC110768.1-201ENST00000509222 400 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC008507.1-201ENST00000587506 734 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC007179.3-201ENST00000604976 235 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 SNORA62.6-201ENST00000606322 83 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 MIR3074-201ENST00000384885 81 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 NPM1P17-201ENST00000479221 602 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC004069.2-201ENST00000505438 1114 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC018797.3-201ENST00000513388 1241 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC008489.1-201ENST00000524271 483 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC107918.3-201ENST00000533272 382 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AL121576.1-201ENST00000556055 276 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC011471.1-201ENST00000585766 187 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AL159169.3-201ENST00000608871 561 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 AC138932.5-201ENST00000617759 563 ntBASIC3.39□□□□□ -1.87
CCDC88CQ9P219 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC88CQ9P219 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 AC017083.1-201ENST00000428093 483 ntBASIC3.38□□□□□ -1.87
CCDC88CQ9P219 RPS26P40-201ENST00000435209 294 ntBASIC3.38□□□□□ -1.87
CCDC88CQ9P219 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 AC239809.1-201ENST00000450470 217 ntBASIC3.38□□□□□ -1.87
CCDC88CQ9P219 CYCSP35-201ENST00000451978 304 ntBASIC3.38□□□□□ -1.87
CCDC88CQ9P219 AC026427.2-201ENST00000506228 536 ntBASIC3.38□□□□□ -1.87
CCDC88CQ9P219 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 SCARNA20.6-201ENST00000517251 106 ntBASIC3.38□□□□□ -1.87
CCDC88CQ9P219 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 AC110741.2-201ENST00000605278 268 ntBASIC3.38□□□□□ -1.87
CCDC88CQ9P219 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 SAGE2P-201ENST00000420011 2126 ntBASIC3.38□□□□□ -1.87
CCDC88CQ9P219 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC88CQ9P219 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 HIGD1AP12-201ENST00000427832 281 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 AL133162.1-201ENST00000463228 453 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 RNU1-143P-201ENST00000516296 146 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 AC006077.1-201ENST00000604746 343 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 U1.23-201ENST00000610293 146 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 uc_338.32-201ENST00000615087 172 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 RNU1-68P-201ENST00000615382 146 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 U1.39-201ENST00000621562 146 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 AC007685.1-201ENST00000329806 452 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 RNA5SP267-201ENST00000364893 126 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 CYCSP4-201ENST00000429682 331 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 BX679664.1-201ENST00000434429 253 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 EXTL2P1-201ENST00000446218 416 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 AC010655.1-201ENST00000449336 292 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 AC006480.1-201ENST00000449887 378 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 AL358832.1-201ENST00000497800 389 ntBASIC3.37□□□□□ -1.87
CCDC88CQ9P219 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC88CQ9P219 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC88CQ9P219 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms