Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 SNORD113.2-201ENST00000364166 89 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 SNORD116.1-201ENST00000365628 92 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 RNU6-83P-201ENST00000384568 112 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 RNU6-178P-201ENST00000384631 104 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 U3.30-201ENST00000391308 210 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 MIR921-201ENST00000401133 56 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 SFR1P1-201ENST00000403720 688 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AL121834.1-202ENST00000404494 277 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 LINC00993-201ENST00000420453 540 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 CENPIP1-201ENST00000425713 902 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AL009174.1-201ENST00000426577 416 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 USP9YP11-201ENST00000427537 717 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 PPIAP21-201ENST00000464473 501 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 MTND2P14-201ENST00000482139 351 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 RPL23AP44-201ENST00000482216 473 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 SMARCE1P4-201ENST00000523647 241 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AC044913.1-201ENST00000557200 430 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 RPL21P7-201ENST00000557463 483 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 BPTFP1-201ENST00000579209 492 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AC016877.3-201ENST00000606778 504 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AP003392.5-201ENST00000607857 415 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AL360219.1-201ENST00000610230 366 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AP000255.1-201ENST00000610276 676 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 MIR3974-201ENST00000637126 96 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 TLK1P1-201ENST00000456760 2440 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AC068254.2-201ENST00000623938 3577 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 AL136164.3-201ENST00000624429 3978 ntBASIC4.69□□□□□ -1.66
NCKIPSDQ9NZQ3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 OR56B2P-201ENST00000317102 954 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 AL590240.1-201ENST00000334118 313 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 OR1L1-202ENST00000373686 1083 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 MIR129-1-201ENST00000384972 72 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 SNORD96B-201ENST00000386148 79 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 RNA5SP397-201ENST00000391323 118 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 Z98745.1-201ENST00000402553 494 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 AL049697.2-201ENST00000403708 294 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 RNU2-65P-201ENST00000410162 185 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 RSU1P3-201ENST00000412878 835 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 HSFY4P-201ENST00000415994 1181 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 RPL7P57-201ENST00000423238 740 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 VDAC1P6-201ENST00000430062 855 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 UBE2V1P1-201ENST00000430836 445 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 ARL2BPP10-201ENST00000446487 531 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 RPL7L1P1-201ENST00000448259 785 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 AC239809.1-201ENST00000450470 217 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 AC233982.1-201ENST00000451247 436 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 AC010468.1-201ENST00000461022 817 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 RPL12P20-201ENST00000475538 479 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 BET1P1-201ENST00000482276 359 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 RPS3AP22-201ENST00000488297 769 ntBASIC4.68□□□□□ -1.66
NCKIPSDQ9NZQ3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms