Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RNU4-6P-201ENST00000410804 122 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AL390879.2-203ENST00000426943 1121 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 HLA-N-201ENST00000437516 135 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AC097499.1-201ENST00000444277 208 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 MTND2P8-201ENST00000450555 1025 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 SNRPGP5-201ENST00000456003 220 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 RPL23AP2-201ENST00000471227 466 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AP000926.1-201ENST00000479573 241 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 RNU6-1102P-201ENST00000516149 96 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 SNORA76.2-201ENST00000517095 137 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AL121594.4-201ENST00000556211 1196 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AC053481.3-201ENST00000577881 843 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 ZNF92P2-201ENST00000600543 1059 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AL606490.9-201ENST00000603331 271 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 MIR6500-201ENST00000622700 86 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 MARK2P15-201ENST00000432204 2186 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.27□□□□□ -1.73
HPS4Q9NQG7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
HPS4Q9NQG7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AC092162.3-201ENST00000624511 1624 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 RNU1-15P-201ENST00000353977 144 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 RNU6-650P-201ENST00000365658 111 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 MIR1183-201ENST00000408856 89 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 TCEA1P4-201ENST00000415066 844 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AC114814.2-201ENST00000419195 485 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 NANOGP6-201ENST00000429190 847 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 RPS27P5-201ENST00000444247 244 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 TPMTP4-201ENST00000450749 678 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AC006511.1-201ENST00000470614 315 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AC022034.3-201ENST00000471393 478 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AC011037.1-201ENST00000483964 558 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 IGLVIV-53-201ENST00000520107 367 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 VN1R79P-201ENST00000593540 513 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AL451086.1-201ENST00000605596 223 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AL355816.1-201ENST00000607951 118 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AC039056.2-201ENST00000622261 511 ntBASIC4.26□□□□□ -1.73
HPS4Q9NQG7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HPS4Q9NQG7 DCAF13P3-201ENST00000561147 1334 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 MAPK10-372ENST00000641954 3413 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 METTL21EP-201ENST00000298105 713 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 U3.15-201ENST00000365398 212 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 HSPE1P12-201ENST00000412576 301 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AL451062.2-201ENST00000427515 271 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AL445584.1-201ENST00000431451 330 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC007389.2-201ENST00000434630 306 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC006011.1-201ENST00000442758 349 ntBASIC4.25□□□□□ -1.73
HPS4Q9NQG7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms