Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 PDSS1P1-201ENST00000422953 1114 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AL662874.1-201ENST00000426065 230 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 HSD3BP5-201ENST00000434856 1132 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AL162388.1-201ENST00000450912 352 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 RPL31P60-201ENST00000478450 367 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 RNU6-1088P-201ENST00000516850 104 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 CYCSP27-201ENST00000527643 293 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 RPA2P3-201ENST00000533268 770 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AC020661.2-201ENST00000560114 134 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 RN7SL155P-201ENST00000581538 263 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AC025857.2-201ENST00000602711 238 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AP005329.3-201ENST00000609924 686 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 AC009779.8-201ENST00000641684 4384 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.38□□□□□ -1.07
RTN4Q9NQC3 PRO1804-201ENST00000623780 2050 ntBASIC8.38□□□□□ -1.07
RTN4Q9NQC3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 Y_RNA.146-201ENST00000363549 102 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 RN7SKP44-201ENST00000363602 316 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 SNORD42.2-201ENST00000365570 69 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 RNU6-1074P-201ENST00000383995 104 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 SNORA10-201ENST00000384084 133 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 Y_RNA.482-201ENST00000384377 111 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 MIR450B-201ENST00000401182 78 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 FABP5P14-201ENST00000437273 393 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 RNU7-152P-201ENST00000458982 64 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 RPL34P22-201ENST00000468193 318 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 RPL21P93-201ENST00000480465 489 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 RN7SL272P-201ENST00000487762 289 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 AC091175.1-201ENST00000522168 572 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 AP003396.4-201ENST00000527574 265 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 THAP2-202ENST00000547843 672 ntTSL 2 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 AC090115.3-201ENST00000553218 849 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 RN7SL123P-201ENST00000577239 292 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 RN7SL237P-201ENST00000580912 287 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 AC004696.1-201ENST00000614345 607 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 C1orf137-201ENST00000624685 386 ntTSL 3 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 AC010653.3-201ENST00000635332 232 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 OR52H1-202ENST00000641796 1061 ntBASIC8.37□□□□□ -1.07
RTN4Q9NQC3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
RTN4Q9NQC3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AC004817.4-201ENST00000602396 3625 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AL034549.2-201ENST00000618285 3373 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AC004925.1-201ENST00000624256 2706 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 FO393411.1-201ENST00000325612 420 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms