Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CNOT7P1-201ENST00000429006 852 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 CBX1P1-201ENST00000440184 427 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 EXTL2P1-201ENST00000446218 416 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 RPL21P18-201ENST00000469899 480 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 CYCSP20-201ENST00000473154 315 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AC041039.1-201ENST00000485656 536 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 IGKV2D-23-201ENST00000518179 286 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AC068831.4-201ENST00000556118 109 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AC079880.2-201ENST00000603790 1213 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AP001486.2-201ENST00000561652 5113 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AL021368.2-201ENST00000606125 5352 ntBASIC4.72□□□□□ -1.65
UPF2Q9HAU5 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
UPF2Q9HAU5 SPATA2P1-201ENST00000431223 2055 ntBASIC4.71□□□□□ -1.65
UPF2Q9HAU5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 RNA5SP443-201ENST00000363083 132 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AL133412.1-201ENST00000380194 2992 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC009302.1-201ENST00000417147 390 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 BTF3P9-201ENST00000418784 283 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 RPL23AP38-201ENST00000423801 469 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC013262.1-201ENST00000426710 252 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 RRM2P4-201ENST00000441721 562 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC099063.2-201ENST00000446360 662 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 RPL23AP23-201ENST00000452590 471 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AL354710.1-201ENST00000453641 246 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC104982.1-201ENST00000478775 574 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 SUMO1P1-201ENST00000497904 306 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 UBE2V1P12-201ENST00000503954 474 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC093720.1-201ENST00000505681 714 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC021146.7-201ENST00000509604 775 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 RNU5A-7P-201ENST00000515979 116 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AL049838.1-201ENST00000563647 981 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AL137849.1-201ENST00000604767 169 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC112503.1-201ENST00000608436 391 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AL121652.1-201ENST00000608851 448 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AP001033.2-201ENST00000609701 1003 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC006946.3-201ENST00000609791 756 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AP005229.2-201ENST00000609980 697 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC084824.4-201ENST00000620106 731 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC010608.2-201ENST00000624830 470 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 AC099654.9-201ENST00000637055 678 ntBASIC4.71□□□□□ -1.66
UPF2Q9HAU5 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
UPF2Q9HAU5 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 RNU6-1005P-201ENST00000384519 107 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 MIR585-201ENST00000384887 94 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 MIR192-201ENST00000384915 110 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 TPT1P2-201ENST00000413105 503 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AL445183.3-201ENST00000414168 502 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 PTP4A1P3-201ENST00000433661 420 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 MTCYBP21-201ENST00000443300 1113 ntBASIC4.7□□□□□ -1.66
UPF2Q9HAU5 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.7□□□□□ -1.66
UPF2Q9HAU5 RPS11P1-201ENST00000451072 473 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms